Warning, /geant4/examples/extended/medical/dna/README.md is written in an unsupported language. File is not indexed.
0001 \page Examples_dna Category "medical/dna"
0002
0003 This directory contains a set of Geant4-DNA examples.
0004
0005 ## Physics
0006 - \link ExampleDnaphysics dnaphysics \endlink Simulation of track structures in liquid water using the Geant4-DNA physics processes and models.
0007
0008 - \link Exampleclustering clustering \endlink Clustering application for direct damage extraction.
0009
0010 - \link Exampleicsd icsd \endlink Use of cross section models for DNA materials,
0011
0012 - \link Examplejetcounter jetcounter \endlink A setup for simulation of a typical experiment with the Jet Counter nanodosemeter
0013
0014 - \link Examplemfp mfp \endlink Simulation of mean free path in liquid water.
0015
0016 - \link ExampleMicrodosimetry microdosimetry \endlink Simulation of the track of a 5 MeV proton in liquid water. Geant4 standard EM models are used in the World volume while Geant4-DNA models are used in a Target volume, declared as a Region.
0017
0018 - \link Examplemicroprox microprox \endlink Computation of proximity functions in liquid water.
0019
0020 - \link Examplemicrotrack microtrack \endlink Calculation of microdosimetry quantities for ion track segments.
0021
0022 - \link Examplemicroyz microyz \endlink Simulation of microdosimetry spectra.
0023
0024 - \link Examplephasespace phasespace \endlink Production of phase space files.
0025
0026 - \link Exampleradial radial \endlink Simulation of radial dose of ions.
0027
0028 - \link Examplerange range \endlink Simulation of ranges.
0029
0030 - \link ExampleSlowing slowing \endlink Simulation of slowing down spectra.
0031
0032 - \link ExampleSplitting splitting \endlink Use of variance reduction to improve the computational efficiency of ionization.
0033
0034 - \link Examplespower spower \endlink Simulation of stopping power.
0035
0036 - \link Examplesvalue svalue \endlink Simulation of S-values in spheres of liquid water using the Geant4-DNA physics processes and models.
0037
0038 - \link Examplewvalue wvalue \endlink Simulation of W-values in liquid water using the Geant4-DNA physics processes and models.
0039
0040 - \link ExampleAuNP AuNP \endlink Simulation calculates absorbed dose around AuNP.
0041
0042 ## Chemistry
0043 - \link ExampleChem1 chem1 \endlink Simple activation of the chemistry module.
0044 - \link ExampleChem2 chem2 \endlink Usage of TimeStepAction in the chemistry module.
0045 - \link ExampleChem3 chem3 \endlink Activate the full interactivity with the chemistry module.
0046 - \link ExampleChem4 chem4 \endlink Simulation of radiochemical yields with the chemistry module.
0047 - \link ExampleChem5 chem5 \endlink Variation of chem4, using the contructors G4EmDNAPhysics_option8 and G4EmDNAChemistry_option1.
0048 - \link ExampleChem6 chem6 \endlink Based on chem4 example, this example provides to score the radiochemical yield G.
0049 - \link Examplescavenger scavenger \endlink Activation of the scavenging process in chemistry.
0050 - \link ExampleUHDR UHDR \endlink Ultra High Dose Rate.
0051
0052 ## Geometry and other
0053 - \link ExamplePdb4dna pdb4dna \endlink Usage of the Protein Data Bank (PDB) file format to build geometries.
0054 - \link ExampleWholeNuclearDNA wholeNuclearDNA \endlink Geometrical description of a full simplified cell nucleus.
0055 - \link Examplednadamage1 dnadamage1 \endlink Damage simulation on a chromatin fiber.
0056 - \link Examplednadamage2 dnadamage2 \endlink Scoring of plasmid DNA strand breaks using the IRT method.
0057 - \link Exampleneuron neuron \endlink Irradiation of a realistic neuron cell.
0058
0059 ## Molecular counters
0060
0061 - \ref Examples_molcounters
0062
0063 See the README page inside each example for more detail.
