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File indexing completed on 2025-01-18 09:58:09

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
0004 // *                                                                  *
0005 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
0006 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
0007 // * conditions of the Geant4 Software License,  included in the file *
0008 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
0009 // * include a list of copyright holders.                             *
0010 // *                                                                  *
0011 // * Neither the authors of this software system, nor their employing *
0012 // * institutes,nor the agencies providing financial support for this *
0013 // * work  make  any representation or  warranty, express or implied, *
0014 // * regarding  this  software system or assume any liability for its *
0015 // * use.  Please see the license in the file  LICENSE  and URL above *
0016 // * for the full disclaimer and the limitation of liability.         *
0017 // *                                                                  *
0018 // * This  code  implementation is the result of  the  scientific and *
0019 // * technical work of the GEANT4 collaboration.                      *
0020 // * By using,  copying,  modifying or  distributing the software (or *
0021 // * any work based  on the software)  you  agree  to acknowledge its *
0022 // * use  in  resulting  scientific  publications,  and indicate your *
0023 // * acceptance of all terms of the Geant4 Software license.          *
0024 // ********************************************************************
0025 //
0026 //
0027 #ifndef G4DNAUPDATESYSTEMMODEL_HH
0028 #define G4DNAUPDATESYSTEMMODEL_HH
0029 #include "G4DNAMesh.hh"
0030 #include "G4VUpdateSystemModel.hh"
0031 
0032 class G4MolecularConfiguration;
0033 class G4DNAMolecularReactionTable;
0034 class G4DNAMolecularReactionData;
0035 
0036 class G4DNAUpdateSystemModel : public G4VUpdateSystemModel
0037 {
0038  public:
0039   using Index        = G4VDNAMesh::Index;
0040   using MolType      = const G4MolecularConfiguration*;
0041   using JumpingData  = std::pair<MolType, Index>;
0042   using ReactionData = const G4DNAMolecularReactionData;
0043 
0044   G4DNAUpdateSystemModel();
0045   ~G4DNAUpdateSystemModel() override = default;
0046   void UpdateSystem(const Index& index, const ReactionData& data);
0047   void UpdateSystem(const Index& index, const JumpingData& data);
0048   void SetMesh(G4DNAMesh*);
0049   void SetGlobalTime(const G4double& globalTime) { fGlobalTime = globalTime; }
0050   void SetVerbose(G4int verbose) { fVerbose = verbose; }
0051 
0052  private:
0053   void KillMolecule(const Index& index, MolType type);
0054   void CreateMolecule(const Index& index, MolType);
0055   void JumpTo(const Index& index, MolType type);
0056   void JumpIn(const Index& index, MolType);
0057   G4DNAMesh* fpMesh  = nullptr;
0058   G4int fVerbose = 0;
0059   G4double fGlobalTime = DBL_MAX;
0060 };
0061 
0062 #endif  // G4DNAUPDATESYSTEMMODEL_HH