include/Geant4/G4DNAEventScheduler.hh

0001 //
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0025 //
0026 //
0027 #ifndef G4DNAEventScheduler_hh
0028 #define G4DNAEventScheduler_hh 1
0029
0030 #include <G4VScheduler.hh>
0031 #include <vector>
0032 #include <map>
0033 #include <memory>
0034 #include "globals.hh"
0035 #include "G4ITModelHandler.hh"
0036 #include "G4ITStepStatus.hh"
0037 #include "G4ITTrackHolder.hh"
0038 #include "G4VStateDependent.hh"
0039 #include "G4ITReaction.hh"
0040 #include "G4DNAEventSet.hh"
0041 #include "G4DNAUpdateSystemModel.hh"
0042 #include "G4H2O2.hh"
0043 #include <CLHEP/Units/SystemOfUnits.h>
0044 class G4VITStepModel;
0045 class G4DNAGillespieDirectMethod;
0046 class G4UserMeshAction;
0047 class IEventScheduler
0048 {
0049  public:
0050   IEventScheduler()          = default;
0051   virtual ~IEventScheduler() = default;
0052 };
0053
0054 class G4DNAEventScheduler : public IEventScheduler
0055 {
0056  public:
0057   using MolType    = const G4MolecularConfiguration*;
0058   using MapList    = std::map<MolType, size_t>;
0059   using MapCounter = std::map<MolType, G4int>;
0060   G4DNAEventScheduler();
0061   ~G4DNAEventScheduler() override;
0062   G4DNAEventScheduler(const G4DNAEventScheduler&) = delete;
0063   G4DNAEventScheduler& operator=(const G4DNAEventScheduler& right) = delete;
0064   void Initialize(const G4DNABoundingBox& boundingBox, G4int pixel);
0065   void InitializeInMesh();
0066   void Voxelizing();
0067   void ReVoxelizing(G4int);
0068   void SetEndTime(const G4double&);
0069   G4double GetStartTime() const;
0070   G4double GetEndTime() const;
0071   G4double GetTimeStep() const;
0072   void SetStartTime(G4double time);
0073
0074   inline void SetVerbose(G4int verbose) { fVerbose = verbose; }
0075   inline G4int GetVerbose() const;
0076   void Stepping();
0077   void SetChangeMesh(G4bool change) { fSetChangeMesh = change; }
0078
0079   void Reset();
0080   void ResetInMesh();
0081   void RunInMesh();
0082   void Run();
0083
0084   void AddTimeToRecord(const G4double& time);
0085
0086   void RecordTime();
0087   void ClearAndReChargeCounter();
0088   void PrintRecordTime();
0089   void Stop();
0090   void SetMaxNbSteps(G4int);
0091   std::map<G4double /*time*/, MapCounter> GetCounterMap() const;
0092   G4DNAMesh* GetMesh() const;
0093   G4int GetPixels() const;
0094   void SetUserMeshAction(std::unique_ptr<G4UserMeshAction>);
0095   static G4bool CheckingReactionRadius(G4double resolution);
0096
0097  private:
0098   G4int fVerbose = 0;
0099   G4bool fInitialized = false;
0100   G4double fStartTime = 1 * CLHEP::picosecond;
0101   G4double fEndTime = 10000 * CLHEP::second;
0102   G4int fStepNumber = 0;
0103   G4int fMaxStep = INT_MAX;
0104   G4bool fRunning = true;
0105   G4double fTimeStep = DBL_MAX;
0106   G4double fGlobalTime = 1 * CLHEP::picosecond;
0107   G4double fJumpingNumber = 0;
0108   G4double fReactionNumber = 0;
0109   G4int fPixel = 0;
0110   G4bool fIsChangeMesh = false;
0111   G4bool fSetChangeMesh = true;
0112   G4int fStepNumberInMesh = 0;
0113   G4double fTransferTime = 0.;
0114   const G4double C = 20;
0115   const G4double D = G4H2O2::Definition()->GetDiffusionCoefficient();  // this is the biggest D
0116
0117   std::unique_ptr<G4DNAMesh> fpMesh;
0118   std::unique_ptr<G4DNAGillespieDirectMethod> fpGillespieReaction;
0119   std::unique_ptr<G4DNAEventSet> fpEventSet;
0120   std::unique_ptr<G4DNAUpdateSystemModel> fpUpdateSystem;
0121   std::unique_ptr<G4UserMeshAction> fpUserMeshAction;
0122   // an aternative Counter
0123   std::map<G4double /*time*/, MapCounter> fCounterMap;
0124   std::set<G4double> fTimeToRecord;
0125   std::set<G4double>::iterator fLastRecoredTime;
0126   void ResetEventSet();
0127   void LastRegisterForCounter();
0128 };
0129 #endif