radiobiology/src/Dose.cc

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0026 //
0027 /// \file radiobiology/src/Dose.cc
0028 /// \brief Implementation of the RadioBio::Dose class
0029
0030 #include "Dose.hh"
0031
0032 #include "G4SystemOfUnits.hh"
0033
0034 #include "DetectorConstruction.hh"
0035 #include "DoseAccumulable.hh"
0036 #include "DoseMessenger.hh"
0037 #include "VoxelizedSensitiveDetector.hh"
0038
0039 #include <fstream>
0040
0041 namespace RadioBio
0042 {
0043
0044 #define width 15L
0045
0046 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0047
0048 Dose::Dose()
0049 {
0050   // Default output filename
0051   fPath = "RadioBio_Dose.out";
0052
0053   // Create the messenger
0054   fMessenger = new DoseMessenger(this);
0055
0056   // Initialize the class
0057   Initialize();
0058 }
0059
0060 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0061
0062 Dose::~Dose()
0063 {
0064   delete fMessenger;
0065 }
0066
0067 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0068
0069 void Dose::Initialize()
0070 {
0071   if (fVerboseLevel > 0) G4cout << "Dose::Initialize() called" << G4endl;
0072
0073   G4int VoxelNumber = VoxelizedSensitiveDetector::GetInstance()->GetTotalVoxelNumber();
0074
0075   fEnDep.resize(VoxelNumber);
0076   fDose.resize(VoxelNumber);
0077   fInitialized = true;
0078 }
0079
0080 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0081
0082 void Dose::Compute()
0083 {
0084   // Skip Dose computation if calculation not enabled.
0085   if (!fCalculationEnabled) {
0086     if (fVerboseLevel > 0) {
0087       G4cout << "Dose::Compute() called but skipped as calculation not enabled" << G4endl;
0088     }
0089     return;
0090   }
0091
0092   if (fCalculated) return;
0093
0094   if (fVerboseLevel > 0) G4cout << "Dose::Compute() called" << G4endl;
0095
0096   auto voxSensDet = VoxelizedSensitiveDetector::GetInstance();
0097
0098   if (voxSensDet == nullptr)
0099     G4Exception("Dose::Compute", "VoxNotInit", FatalException,
0100                 "Calculating dose without voxelized geometry pointer!");
0101
0102   G4double voxelMass = voxSensDet->GetVoxelMass();
0103
0104   for (G4int v = 0; v < voxSensDet->GetTotalVoxelNumber(); v++) {
0105     if (fVerboseLevel > 1) G4cout << "Calculating Dose for voxel number " << v << G4endl;
0106
0107     // compute total Dose
0108     fDose[v] = fEnDep[v] / voxelMass;
0109   }
0110
0111   fCalculated = true;
0112 }
0113
0114 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0115
0116 void Dose::Store()
0117 {
0118   // Skip Dose store if calculation not enabled.
0119   if (!fCalculationEnabled) {
0120     if (fVerboseLevel > 0) {
0121       G4cout << "Dose::Store() called but skipped as calculation not enabled" << G4endl;
0122     }
0123     return;
0124   }
0125
0126   if (fSaved == true)
0127     G4Exception("Dose::Store", "DoseOverwrite", JustWarning,
0128                 "Overwriting Dose file. For multiple runs, change filename.");
0129
0130   Compute();
0131
0132   std::ofstream ofs(fPath);
0133
0134   if (ofs.is_open()) {
0135     ofs << "x_index" << std::setw(width) << "y_index" << std::setw(width) << "z_index"
0136         << std::setw(width) << "Dose (Gy)" << G4endl;
0137
0138     auto voxSensDet = VoxelizedSensitiveDetector::GetInstance();
0139
0140     for (G4int i = 0; i < voxSensDet->GetVoxelNumberAlongX(); i++)
0141       for (G4int j = 0; j < voxSensDet->GetVoxelNumberAlongY(); j++)
0142         for (G4int k = 0; k < voxSensDet->GetVoxelNumberAlongZ(); k++) {
0143           G4int v = voxSensDet->GetThisVoxelNumber(i, j, k);
0144           ofs << i << std::setw(width) << j << std::setw(width) << k << std::setw(width)
0145               << fDose[v] / gray << G4endl;
0146         }
0147   }
0148   if (fVerboseLevel > 0) {
0149     G4cout << "Dose: Dose written to " << fPath << G4endl;
0150   }
0151   fSaved = true;
0152 }
0153
0154 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0155
0156 void Dose::AddFromAccumulable(G4VAccumulable* GenAcc)
0157 {
0158   DoseAccumulable* acc = (DoseAccumulable*)GenAcc;
0159   AddEnergyDeposit(acc->GetEnDeposit());
0160   fCalculated = false;
0161 }
0162
0163 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0164
0165 void Dose::Reset()
0166 {
0167   if (fVerboseLevel > 1) {
0168     G4cout << "Dose::Reset(): ";
0169   }
0170   fEnDep = 0.0;
0171   fDose = 0.0;
0172   fCalculated = false;
0173 }
0174
0175 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0176
0177 void Dose::PrintParameters()
0178 {
0179   G4cout << "*******************************************" << G4endl
0180          << "****** Parameters of the class Dose *******" << G4endl
0181          << "*******************************************" << G4endl;
0182   PrintVirtualParameters();
0183 }
0184
0185 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0186
0187 }  // namespace RadioBio