wholeNuclearDNA/include/ChromosomeParameterisation.hh

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
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0024 // ********************************************************************
0025 //
0026 // This example is provided by the Geant4-DNA collaboration
0027 // Any report or published results obtained using the Geant4-DNA software
0028 // and the DNA geometry given in the Geom_DNA example
0029 // shall cite the following Geant4-DNA collaboration publications:
0030 // [1] NIM B 298 (2013) 47-54
0031 // [2] Med. Phys. 37 (2010) 4692-4708
0032 // The Geant4-DNA web site is available at http://geant4-dna.org
0033 //
0034 /// \file ChromosomeParameterisation.hh
0035 /// \brief Definition of the ChromosomeParameterisation class
0036
0037 #ifndef ChromosomeParameterisation_H
0038 #define ChromosomeParameterisation_H 1
0039
0040 #include <G4Box.hh>
0041 #include <G4Ellipsoid.hh>
0042 #include <G4Orb.hh>
0043 #include <G4RotationMatrix.hh>
0044 #include <G4ThreeVector.hh>
0045 #include <G4Torus.hh>
0046 #include <G4Trap.hh>
0047 #include <G4Trd.hh>
0048 #include <G4Tubs.hh>
0049 #include <G4Types.hh>
0050 #include <G4VPVParameterisation.hh>
0051 #include <vector>
0052
0053 class G4VPhysicalVolume;
0054 class G4Box;
0055 class G4Trd;
0056 class G4Trap;
0057 class G4Cons;
0058 class G4Orb;
0059 class G4Sphere;
0060 class G4Torus;
0061 class G4Para;
0062 class G4Hype;
0063 class G4Tubs;
0064 class G4Polycone;
0065 class G4Polyhedra;
0066 class G4Ellipsoid;
0067
0068 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0069
0070 class ChromosomeParameterisation : public G4VPVParameterisation
0071 {
0072   public:
0073     ChromosomeParameterisation(const char* filename);
0074
0075     virtual ~ChromosomeParameterisation();
0076     inline int GetNumRosettes() { return fPositions.size(); }
0077
0078     virtual void ComputeTransformation(const G4int copyNo, G4VPhysicalVolume* physVol) const;
0079
0080     virtual void ComputeDimensions(G4Tubs& rosette, const G4int copyNo,
0081                                    const G4VPhysicalVolume* physVol) const;
0082
0083   private:
0084     // Dummy declarations to get rid of warnings ...
0085     virtual void ComputeDimensions(G4Box&, const G4int, const G4VPhysicalVolume*) const {}
0086     virtual void ComputeDimensions(G4Trd&, const G4int, const G4VPhysicalVolume*) const {}
0087     virtual void ComputeDimensions(G4Trap&, const G4int, const G4VPhysicalVolume*) const {}
0088     virtual void ComputeDimensions(G4Cons&, const G4int, const G4VPhysicalVolume*) const {}
0089     virtual void ComputeDimensions(G4Sphere&, const G4int, const G4VPhysicalVolume*) const {}
0090     virtual void ComputeDimensions(G4Orb&, const G4int, const G4VPhysicalVolume*) const {}
0091     virtual void ComputeDimensions(G4Torus&, const G4int, const G4VPhysicalVolume*) const {}
0092     virtual void ComputeDimensions(G4Para&, const G4int, const G4VPhysicalVolume*) const {}
0093     virtual void ComputeDimensions(G4Hype&, const G4int, const G4VPhysicalVolume*) const {}
0094     virtual void ComputeDimensions(G4Polycone&, const G4int, const G4VPhysicalVolume*) const {}
0095     virtual void ComputeDimensions(G4Polyhedra&, const G4int, const G4VPhysicalVolume*) const {}
0096     virtual void ComputeDimensions(G4Ellipsoid&, const G4int, const G4VPhysicalVolume*) const {}
0097
0098     std::vector<G4ThreeVector*> fPositions;
0099     std::vector<G4RotationMatrix*> fRotations;
0100 };
0101
0102 #endif