pdb4dna/src/PDBresidue.cc

0001 //
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0025 //
0026 /// \file PDBresidue.cc
0027 /// \brief Implementation of the PDBresidue class
0028
0029 // This example is provided by the Geant4-DNA collaboration
0030 // Any report or published results obtained using the Geant4-DNA software
0031 // shall cite the following Geant4-DNA collaboration publication:
0032 // Med. Phys. 37 (2010) 4692-4708
0033 // Delage et al. PDB4DNA: implementation of DNA geometry from the Protein Data
0034 //                  Bank (PDB) description for Geant4-DNA Monte-Carlo
0035 //                  simulations (submitted to Comput. Phys. Commun.)
0036 // The Geant4-DNA web site is available at http://geant4-dna.org
0037 //
0038 //
0039
0040 #include "PDBresidue.hh"
0041
0042 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0043
0044 Residue::Residue()
0045   : fResName(""),
0046     fResSeq(0),
0047     fVisible(false),
0048     fSelected(false),
0049     fCenterX(0),
0050     fCenterY(0),
0051     fCenterZ(0),
0052     fNbAtom(0),
0053     fpNext(0),
0054     fpFirst(0)
0055 {}
0056
0057 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0058
0059 Residue::Residue(const std::string& rN, int rS)
0060 {
0061   fResName = rN;  // Residue name
0062   fResSeq = rS;  // Residue sequence number
0063   fVisible = false;
0064   fSelected = false;
0065   fCenterX = 0;
0066   fCenterY = 0;
0067   fCenterZ = 0;
0068   fNbAtom = 0;
0069   fpNext = 0;
0070   fpFirst = 0;
0071 }
0072
0073 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0074
0075 Residue* Residue::GetNext()
0076 {
0077   return fpNext;
0078 }
0079
0080 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0081
0082 Atom* Residue::GetFirst()
0083 {
0084   return fpFirst;
0085 }
0086
0087 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0088
0089 int Residue::GetID()
0090 {
0091   return fResSeq;
0092 }
0093
0094 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0095
0096 void Residue::SetNext(Residue* residueNext)
0097 {
0098   fpNext = residueNext;
0099 }
0100
0101 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0102
0103 void Residue::SetFirst(Atom* atomFirst)
0104 {
0105   fpFirst = atomFirst;
0106 }