neuron/src/ITTrackingAction.cc

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0025 //
0026 // This example is provided by the Geant4-DNA collaboration
0027 // Any report or published results obtained using the Geant4-DNA software
0028 // shall cite the following Geant4-DNA collaboration publication:
0029 // Med. Phys. 37 (2010) 4692-4708
0030 // and papers
0031 // M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
0032 // O. Belov et al. Physica Medica 32 (2016) 1510-1520
0033 // The Geant4-DNA web site is available at http://geant4-dna.org
0034 //
0035 // -------------------------------------------------------------------
0036 // November 2016
0037 // -------------------------------------------------------------------
0038 //
0039 //
0040 /// \file ITTrackingAction.hh
0041 /// \brief Implementation of the ITTrackingAction class
0042
0043 #include "ITTrackingAction.hh"
0044
0045 #include "G4Molecule.hh"
0046 #include "G4PhysicalConstants.hh"
0047 #include "G4SystemOfUnits.hh"
0048 #include "G4Track.hh"
0049 #include "G4UnitsTable.hh"
0050 //
0051 // #include "NeuronHitCompartments.hh"
0052 #include "Run.hh"
0053
0054 #include "G4H2O.hh"
0055 #include "G4LogicalVolume.hh"
0056 #include "G4LogicalVolumeStore.hh"
0057 #include "G4MoleculeCounter.hh"
0058 #include "G4MoleculeGun.hh"
0059 #include "G4MoleculeTable.hh"
0060 #include "G4PhysicalVolumeStore.hh"
0061 #include "G4RunManager.hh"
0062 #include "G4VPhysicalVolume.hh"
0063
0064 #include <G4Scheduler.hh>
0065 #include <cmath>
0066
0067 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0068
0069 ITTrackingAction::ITTrackingAction() : G4UserTrackingAction() {}
0070
0071 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0072
0073 ITTrackingAction::~ITTrackingAction() {}
0074
0075 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0076
0077 void ITTrackingAction::PreUserTrackingAction(const G4Track* track)
0078 {
0079   // Target volumes
0080   G4VPhysicalVolume* volumeStep = track->GetTouchableHandle()->GetVolume();
0081   G4VPhysicalVolume* volumeMedium = G4PhysicalVolumeStore::GetInstance()->GetVolume("Medium");
0082   G4VPhysicalVolume* volumeSlice = G4PhysicalVolumeStore::GetInstance()->GetVolume("BoundingSlice");
0083
0084   // count produced species in neuron
0085   G4Molecule* molecule = GetMolecule(track);
0086   // const G4String& moleculeName = molecule->GetName();
0087   // G4double GTime  = track->GetGlobalTime() /picosecond;
0088
0089   Run* run = static_cast<Run*>(G4RunManager::GetRunManager()->GetNonConstCurrentRun());
0090   // run->MoleculeCount(moleculeName,GTime);
0091
0092   // time steps
0093
0094   // particles outside neuron structure
0095   // if (volumeStep == volumeMedium || volumeStep == volumeSlice)
0096   //{
0097   // run->MoleculeCount(molecule);
0098   //}
0099   // count secondary particles in neuron
0100   // else //
0101   if (volumeStep != volumeMedium && volumeStep != volumeSlice) {
0102     run->MoleculeCountNeuron(molecule);
0103     // run->MoleculeCountNeuron(moleculeName,GTime);
0104
0105     // number of molecules at time of 1 ns !
0106     // if ( (GTime > T_1ns-3.) && (GTime <= T_1ns))
0107     // {
0108     //  if (moleculeName =="OH^0") // OH* radical
0109     //  {
0110     // fEventAction->MoleculeCountNeuron()
0111     // G4MoleculeCounter::Instance()->GetNMoleculesAtTime(moleculeName, GTime);
0112
0113     //   }
0114     // }
0115   }
0116 }
0117
0118 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0119
0120 void ITTrackingAction::PostUserTrackingAction(const G4Track* /*track*/) {}