neuron/src/ITTrackingAction.cc

0001 //
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0025 //
0026 /// \file ITTrackingAction.cc
0027 /// \brief Implementation of the ITTrackingAction class
0028
0029 // This example is provided by the Geant4-DNA collaboration
0030 // Any report or published results obtained using the Geant4-DNA software
0031 // shall cite the following Geant4-DNA collaboration publication:
0032 // Med. Phys. 37 (2010) 4692-4708
0033 // and papers
0034 // M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
0035 // O. Belov et al. Physica Medica 32 (2016) 1510-1520
0036 // The Geant4-DNA web site is available at http://geant4-dna.org
0037 //
0038 // -------------------------------------------------------------------
0039 // November 2016
0040 // -------------------------------------------------------------------
0041 //
0042 //
0043
0044 #include "ITTrackingAction.hh"
0045
0046 #include "G4Molecule.hh"
0047 #include "G4PhysicalConstants.hh"
0048 #include "G4SystemOfUnits.hh"
0049 #include "G4Track.hh"
0050 #include "G4UnitsTable.hh"
0051 //
0052 // #include "NeuronHitCompartments.hh"
0053 #include "Run.hh"
0054
0055 #include "G4H2O.hh"
0056 #include "G4LogicalVolume.hh"
0057 #include "G4LogicalVolumeStore.hh"
0058 #include "G4MoleculeCounter.hh"
0059 #include "G4MoleculeGun.hh"
0060 #include "G4MoleculeTable.hh"
0061 #include "G4PhysicalVolumeStore.hh"
0062 #include "G4RunManager.hh"
0063 #include "G4VPhysicalVolume.hh"
0064
0065 #include <G4Scheduler.hh>
0066 #include <cmath>
0067
0068 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0069
0070 ITTrackingAction::ITTrackingAction() : G4UserTrackingAction() {}
0071
0072 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0073
0074 ITTrackingAction::~ITTrackingAction() {}
0075
0076 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0077
0078 void ITTrackingAction::PreUserTrackingAction(const G4Track* track)
0079 {
0080   // Target volumes
0081   G4VPhysicalVolume* volumeStep = track->GetTouchableHandle()->GetVolume();
0082   G4VPhysicalVolume* volumeMedium = G4PhysicalVolumeStore::GetInstance()->GetVolume("Medium");
0083   G4VPhysicalVolume* volumeSlice = G4PhysicalVolumeStore::GetInstance()->GetVolume("BoundingSlice");
0084
0085   // count produced species in neuron
0086   G4Molecule* molecule = GetMolecule(track);
0087   // const G4String& moleculeName = molecule->GetName();
0088   // G4double GTime  = track->GetGlobalTime() /picosecond;
0089
0090   Run* run = static_cast<Run*>(G4RunManager::GetRunManager()->GetNonConstCurrentRun());
0091   // run->MoleculeCount(moleculeName,GTime);
0092
0093   // time steps
0094
0095   // particles outside neuron structure
0096   // if (volumeStep == volumeMedium || volumeStep == volumeSlice)
0097   //{
0098   // run->MoleculeCount(molecule);
0099   //}
0100   // count secondary particles in neuron
0101   // else //
0102   if (volumeStep != volumeMedium && volumeStep != volumeSlice) {
0103     run->MoleculeCountNeuron(molecule);
0104     // run->MoleculeCountNeuron(moleculeName,GTime);
0105
0106     // number of molecules at time of 1 ns !
0107     // if ( (GTime > T_1ns-3.) && (GTime <= T_1ns))
0108     // {
0109     //  if (moleculeName =="OH^0") // OH* radical
0110     //  {
0111     // fEventAction->MoleculeCountNeuron()
0112     // G4MoleculeCounter::Instance()->GetNMoleculesAtTime(moleculeName, GTime);
0113
0114     //   }
0115     // }
0116   }
0117 }
0118
0119 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0120
0121 void ITTrackingAction::PostUserTrackingAction(const G4Track* /*track*/) {}