Warning, /geant4/examples/extended/medical/dna/neuron/neuron.out is written in an unsupported language. File is not indexed.
0001 Environment variable "G4FORCE_RUN_MANAGER_TYPE" enabled with value == Serial. Forcing G4RunManager type...
0002
0003 ############################################
0004 !!! WARNING - FPE detection is activated !!!
0005 ############################################
0006
0007
0008 ################################
0009 !!! G4Backtrace is activated !!!
0010 ################################
0011
0012
0013 **************************************************************
0014 Geant4 version Name: geant4-11-02-ref-06 (28-June-2024)
0015 Copyright : Geant4 Collaboration
0016 References : NIM A 506 (2003), 250-303
0017 : IEEE-TNS 53 (2006), 270-278
0018 : NIM A 835 (2016), 186-225
0019 WWW : http://geant4.org/
0020 **************************************************************
0021
0022 NeuronLoadDataFile::SingleNeuronSWCfile: number of strings=2922 in file GranuleCell-Nr2.CNG.swc
0023 Total number of compartments into Neuron : 2914
0024
0025 Livermore + DNAphysics is activated!
0026 ---- Begin of Neuron Construction! ----
0027 ==========================================================
0028 Side length of word volume is calculated : 407.347 um
0029 Radius of homogeneous medium is calculated : 203.674 um
0030 Overall dimensions (um) of neuron morphology :
0031 width = 250.225 height = 315.035 depth = 63.8148
0032 Volume (um3), surface (um2) and mass (ug) of Bounding Slice are calculated :
0033 5.03049e+06 229803 5.03049
0034
0035 Volume (um3), surface (um2) and mass(ug) of Neuron are calculated :
0036 12100 30379.7 0.0121
0037 Total number of compartments into Neuron : 2914
0038 Shift values (um) for Neuron translation are calculated :
0039 shiftX = 35.13 shiftY = 99.995 shiftZ = 2.025
0040 ---- Soma for construction: ----
0041 Total number of compartments into Soma : 3
0042 ---- Dendrites for construction: ----
0043 Total number of compartments into Dendrites: 2775
0044 ---- Axon for construction: ----
0045 Total number of compartments into Axon : 136
0046 ---- Spines not found! ----
0047
0048 ---- End of Neuron Construction! ----
0049 ==========================================================
0050
0051 Visualization Manager instantiating with verbosity "warnings (3)"...
0052 Visualization Manager initialising...
0053 Registering graphics systems...
0054
0055 You have successfully registered the following graphics systems.
0056 Registered graphics systems are:
0057 ASCIITree (ATree)
0058 DAWNFILE (DAWNFILE)
0059 G4HepRepFile (HepRepFile)
0060 RayTracer (RayTracer)
0061 VRML2FILE (VRML2FILE)
0062 gMocrenFile (gMocrenFile)
0063 TOOLSSG_OFFSCREEN (TSG_OFFSCREEN)
0064 TOOLSSG_OFFSCREEN (TSG_OFFSCREEN, TSG_FILE)
0065 OpenGLImmediateQt (OGLIQt, OGLI)
0066 OpenGLStoredQt (OGLSQt, OGL, OGLS)
0067 OpenGLImmediateXm (OGLIXm, OGLIQt_FALLBACK)
0068 OpenGLStoredXm (OGLSXm, OGLSQt_FALLBACK)
0069 OpenGLImmediateX (OGLIX, OGLIQt_FALLBACK, OGLIXm_FALLBACK)
0070 OpenGLStoredX (OGLSX, OGLSQt_FALLBACK, OGLSXm_FALLBACK)
0071 RayTracerX (RayTracerX)
0072 Qt3D (Qt3D)
0073 TOOLSSG_X11_GLES (TSG_X11_GLES, TSGX11, TSG_XT_GLES_FALLBACK)
0074 TOOLSSG_X11_ZB (TSG_X11_ZB, TSGX11ZB)
0075 TOOLSSG_XT_GLES (TSG_XT_GLES, TSGXt, TSG_QT_GLES_FALLBACK)
0076 TOOLSSG_XT_ZB (TSG_XT_ZB, TSGXtZB)
0077 TOOLSSG_QT_GLES (TSG_QT_GLES, TSGQt, TSG)
0078 TOOLSSG_QT_ZB (TSG_QT_ZB, TSGQtZB)
0079 You may choose a graphics system (driver) with a parameter of
0080 the command "/vis/open" or "/vis/sceneHandler/create",
0081 or you may omit the driver parameter and choose at run time:
0082 - by argument in the construction of G4VisExecutive
0083 - by environment variable "G4VIS_DEFAULT_DRIVER"
0084 - by entry in "~/.g4session"
0085 - by build flags.
0086 - Note: This feature is not allowed in batch mode.
0087 For further information see "examples/basic/B1/exampleB1.cc"
0088 and "vis.mac".
0089
0090 Registering model factories...
0091
0092 You have successfully registered the following model factories.
0093 Registered model factories:
0094 generic
0095 drawByAttribute
0096 drawByCharge
0097 drawByOriginVolume
0098 drawByParticleID
0099 drawByEncounteredVolume
0100
0101 Registered models:
0102 None
0103
0104 Registered filter factories:
0105 attributeFilter
0106 chargeFilter
0107 originVolumeFilter
0108 particleFilter
0109 encounteredVolumeFilter
0110
0111 Registered filters:
0112 None
0113
0114 You have successfully registered the following user vis actions.
0115 Run Duration User Vis Actions: none
0116 End of Event User Vis Actions: none
0117 End of Run User Vis Actions: none
0118
0119 Some /vis commands (optionally) take a string to specify colour.
0120 "/vis/list" to see available colours.
0121 =======================================================================
0122 ====== Electromagnetic Physics Parameters ========
0123 =======================================================================
0124 LPM effect enabled 1
0125 Enable creation and use of sampling tables 0
0126 Apply cuts on all EM processes 0
0127 Use combined TransportationWithMsc Disabled
0128 Use general process 0
0129 Enable linear polarisation for gamma 0
0130 Enable photoeffect sampling below K-shell 1
0131 Enable sampling of quantum entanglement 0
0132 X-section factor for integral approach 0.8
0133 Min kinetic energy for tables 100 eV
0134 Max kinetic energy for tables 100 TeV
0135 Number of bins per decade of a table 20
0136 Verbose level 1
0137 Verbose level for worker thread 0
0138 Bremsstrahlung energy threshold above which
0139 primary e+- is added to the list of secondary 100 TeV
0140 Bremsstrahlung energy threshold above which primary
0141 muon/hadron is added to the list of secondary 100 TeV
0142 Lowest triplet kinetic energy 1 MeV
0143 Enable sampling of gamma linear polarisation 0
0144 5D gamma conversion model type 0
0145 5D gamma conversion model on isolated ion 0
0146 Livermore data directory epics_2017
0147 =======================================================================
0148 ====== Ionisation Parameters ========
0149 =======================================================================
0150 Step function for e+- (0.2, 0.01 mm)
0151 Step function for muons/hadrons (0.1, 0.05 mm)
0152 Step function for light ions (0.1, 0.02 mm)
0153 Step function for general ions (0.1, 0.001 mm)
0154 Lowest e+e- kinetic energy 100 eV
0155 Lowest muon/hadron kinetic energy 1 keV
0156 Use ICRU90 data 1
0157 Fluctuations of dE/dx are enabled 1
0158 Type of fluctuation model for leptons and hadrons Urban
0159 Use built-in Birks satuaration 0
0160 Build CSDA range enabled 0
0161 Use cut as a final range enabled 0
0162 Enable angular generator interface 1
0163 Max kinetic energy for CSDA tables 1 GeV
0164 Max kinetic energy for NIEL computation 1 MeV
0165 Linear loss limit 0.01
0166 Read data from file for e+e- pair production by mu 0
0167 =======================================================================
0168 ====== Multiple Scattering Parameters ========
0169 =======================================================================
0170 Type of msc step limit algorithm for e+- 2
0171 Type of msc step limit algorithm for muons/hadrons 0
0172 Msc lateral displacement for e+- enabled 1
0173 Msc lateral displacement for muons and hadrons 1
0174 Urban msc model lateral displacement alg96 1
0175 Range factor for msc step limit for e+- 0.08
0176 Range factor for msc step limit for muons/hadrons 0.2
0177 Geometry factor for msc step limitation of e+- 2.5
0178 Safety factor for msc step limit for e+- 0.6
0179 Skin parameter for msc step limitation of e+- 3
0180 Lambda limit for msc step limit for e+- 1 mm
0181 Use Mott correction for e- scattering 1
0182 Factor used for dynamic computation of angular
0183 limit between single and multiple scattering 1
0184 Fixed angular limit between single
0185 and multiple scattering 3.1416 rad
0186 Upper energy limit for e+- multiple scattering 100 MeV
0187 Type of electron single scattering model 0
0188 Type of nuclear form-factor 1
0189 Screening factor 1
0190 =======================================================================
0191 ====== Atomic Deexcitation Parameters ========
0192 =======================================================================
0193 Fluorescence enabled 1
0194 Directory in G4LEDATA for fluorescence data files fluor
0195 Auger electron cascade enabled 1
0196 PIXE atomic de-excitation enabled 0
0197 De-excitation module ignores cuts 1
0198 Type of PIXE cross section for hadrons Empirical
0199 Type of PIXE cross section for e+- Livermore
0200 =======================================================================
0201 ====== DNA Physics Parameters ========
0202 =======================================================================
0203 Use fast sampling in DNA models 0
0204 Use Stationary option in DNA models 0
0205 Use DNA with multiple scattering of e- 0
0206 Use DNA e- solvation model type 11003
0207 =======================================================================
0208
0209 ### === Deexcitation model UAtomDeexcitation is activated for 4 regions:
0210 DefaultRegionForTheWorld 1 1 0
0211 Soma 1 1 0
0212 Dendrites 1 1 0
0213 Axon 1 1 0
0214 ### === Auger flag: 1
0215 ### === Ignore cuts flag: 1
0216
0217 phot: for gamma SubType=12 BuildTable=0
0218 LambdaPrime table from 200 keV to 100 TeV in 174 bins
0219 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0220 LivermorePhElectric : Emin= 0 eV Emax= 100 TeV SauterGavrila Fluo
0221
0222 compt: for gamma SubType=13 BuildTable=1
0223 Lambda table from 100 eV to 1 MeV, 20 bins/decade, spline: 1
0224 LambdaPrime table from 1 MeV to 100 TeV in 160 bins
0225 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0226 LivermoreCompton : Emin= 0 eV Emax= 1 GeV Fluo
0227 KleinNishina : Emin= 1 GeV Emax= 100 TeV Fluo
0228
0229 conv: for gamma SubType=14 BuildTable=1
0230 Lambda table from 1.022 MeV to 100 TeV, 20 bins/decade, spline: 1
0231 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0232 Livermore5DConversion : Emin= 0 eV Emax= 100 TeV ModifiedTsai
0233
0234 Rayl: for gamma SubType=11 BuildTable=1
0235 Lambda table from 100 eV to 150 keV, 20 bins/decade, spline: 0
0236 LambdaPrime table from 150 keV to 100 TeV in 176 bins
0237 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0238 LivermoreRayleigh : Emin= 0 eV Emax= 100 TeV CullenGenerator
0239
0240 msc: for e- SubType= 10
0241 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0242 GoudsmitSaunderson : Emin= 0 eV Emax= 100 MeV Nbins=120 100 eV - 100 MeV
0243 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0244 WentzelVIUni : Emin= 100 MeV Emax= 100 TeV Nbins=120 100 MeV - 100 TeV
0245 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0246
0247 eIoni: for e- XStype:3 SubType=2
0248 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0249 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0250 StepFunction=(0.2, 0.01 mm), integ: 3, fluct: 1, linLossLim= 0.01
0251 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0252 LowEnergyIoni : Emin= 0 eV Emax= 100 keV deltaVI
0253 MollerBhabha : Emin= 100 keV Emax= 100 TeV deltaVI
0254
0255 eBrem: for e- XStype:4 SubType=3
0256 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0257 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0258 LPM flag: 1 for E > 1 GeV, VertexHighEnergyTh(GeV)= 100000
0259 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0260 eBremSB : Emin= 0 eV Emax= 1 GeV AngularGen2BS
0261 eBremLPM : Emin= 1 GeV Emax= 100 TeV AngularGen2BS
0262
0263 ePairProd: for e- XStype:1 SubType=4
0264 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0265 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 0
0266 Sampling table 25x1001 from 0.1 GeV to 100 TeV
0267 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0268 ePairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0269
0270 CoulombScat: for e- XStype:1 SubType=1 BuildTable=1
0271 Lambda table from 100 MeV to 100 TeV, 20 bins/decade, spline: 0
0272 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0273 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0274 eCoulombScattering : Emin= 100 MeV Emax= 100 TeV
0275
0276 msc: for e+ SubType= 10
0277 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0278 GoudsmitSaunderson : Emin= 0 eV Emax= 100 MeV Nbins=120 100 eV - 100 MeV
0279 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0280 WentzelVIUni : Emin= 100 MeV Emax= 100 TeV Nbins=120 100 MeV - 100 TeV
0281 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0282
0283 eIoni: for e+ XStype:3 SubType=2
0284 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0285 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0286 StepFunction=(0.2, 0.01 mm), integ: 3, fluct: 1, linLossLim= 0.01
0287 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0288 MollerBhabha : Emin= 0 eV Emax= 100 TeV deltaVI
0289
0290 eBrem: for e+ XStype:4 SubType=3
0291 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0292 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0293 LPM flag: 1 for E > 1 GeV, VertexHighEnergyTh(GeV)= 100000
0294 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0295 eBremSB : Emin= 0 eV Emax= 1 GeV AngularGen2BS
0296 eBremLPM : Emin= 1 GeV Emax= 100 TeV AngularGen2BS
0297
0298 ePairProd: for e+ XStype:1 SubType=4
0299 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0300 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 0
0301 Sampling table 25x1001 from 0.1 GeV to 100 TeV
0302 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0303 ePairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0304
0305 annihil: for e+ XStype:2 SubType=5 AtRestModel:Allison BuildTable=0
0306 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0307 eplus2gg : Emin= 0 eV Emax= 100 TeV
0308
0309 CoulombScat: for e+ XStype:1 SubType=1 BuildTable=1
0310 Lambda table from 100 MeV to 100 TeV, 20 bins/decade, spline: 0
0311 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0312 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0313 eCoulombScattering : Emin= 100 MeV Emax= 100 TeV
0314
0315 msc: for proton SubType= 10
0316 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0317 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0318 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0319
0320 hIoni: for proton XStype:3 SubType=2
0321 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0322 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0323 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0324 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0325 Bragg : Emin= 0 eV Emax= 2 MeV deltaVI
0326 BetheBloch : Emin= 2 MeV Emax= 100 TeV deltaVI
0327
0328 hBrems: for proton XStype:1 SubType=3
0329 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0330 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0331 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0332 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0333 ===== Limit on energy threshold has been applied
0334
0335 hPairProd: for proton XStype:1 SubType=4
0336 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0337 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0338 Sampling table 17x1001 from 7.50618 GeV to 100 TeV
0339 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0340 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0341
0342 CoulombScat: for proton XStype:1 SubType=1 BuildTable=1
0343 Lambda table from threshold to 100 TeV, 20 bins/decade, spline: 0
0344 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0345 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0346 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0347
0348 nuclearStopping: for proton SubType=8 BuildTable=0
0349 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0350 ICRU49NucStopping : Emin= 0 eV Emax= 1 MeV
0351
0352 msc: for GenericIon SubType= 10
0353 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0354 UrbanMsc : Emin= 0 eV Emax= 100 TeV
0355 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0356
0357 ionIoni: for GenericIon XStype:3 SubType=2
0358 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0359 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0360 StepFunction=(0.1, 0.001 mm), integ: 3, fluct: 1, linLossLim= 0.02
0361 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0362 LindhardSorensen : Emin= 0 eV Emax= 100 TeV deltaVI
0363
0364 nuclearStopping: for GenericIon SubType=8 BuildTable=0
0365 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0366 ICRU49NucStopping : Emin= 0 eV Emax= 1 MeV
0367
0368 msc: for alpha SubType= 10
0369 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0370 UrbanMsc : Emin= 0 eV Emax= 100 TeV
0371 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0372
0373 ionIoni: for alpha XStype:3 SubType=2
0374 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0375 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0376 StepFunction=(0.1, 0.02 mm), integ: 3, fluct: 1, linLossLim= 0.02
0377 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0378 BraggIon : Emin= 0 eV Emax=7.9452 MeV deltaVI
0379 BetheBloch : Emin=7.9452 MeV Emax= 100 TeV deltaVI
0380
0381 nuclearStopping: for alpha SubType=8 BuildTable=0
0382 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0383 ICRU49NucStopping : Emin= 0 eV Emax= 1 MeV
0384
0385 msc: for anti_proton SubType= 10
0386 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0387 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0388 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0389
0390 hIoni: for anti_proton XStype:3 SubType=2
0391 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0392 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0393 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0394 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0395 ICRU73QO : Emin= 0 eV Emax= 2 MeV deltaVI
0396 BetheBloch : Emin= 2 MeV Emax= 100 TeV deltaVI
0397
0398 hBrems: for anti_proton XStype:1 SubType=3
0399 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0400 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0401 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0402 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0403 ===== Limit on energy threshold has been applied
0404
0405 hPairProd: for anti_proton XStype:1 SubType=4
0406 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0407 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0408 Sampling table 17x1001 from 7.50618 GeV to 100 TeV
0409 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0410 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0411
0412 CoulombScat: for anti_proton XStype:1 SubType=1 BuildTable=1
0413 Lambda table from threshold to 100 TeV, 20 bins/decade, spline: 0
0414 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0415 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0416 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0417
0418 msc: for kaon+ SubType= 10
0419 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0420 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0421 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0422
0423 hIoni: for kaon+ XStype:3 SubType=2
0424 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0425 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0426 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0427 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0428 Bragg : Emin= 0 eV Emax=1.05231 MeV deltaVI
0429 BetheBloch : Emin=1.05231 MeV Emax= 100 TeV deltaVI
0430
0431 hBrems: for kaon+ XStype:1 SubType=3
0432 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0433 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0434 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0435 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0436 ===== Limit on energy threshold has been applied
0437
0438 hPairProd: for kaon+ XStype:1 SubType=4
0439 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0440 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0441 Sampling table 18x1001 from 3.94942 GeV to 100 TeV
0442 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0443 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0444
0445 CoulombScat: for kaon+ XStype:1 SubType=1 BuildTable=1
0446 Lambda table from threshold to 100 TeV, 20 bins/decade, spline: 0
0447 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0448 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0449 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0450
0451 msc: for kaon- SubType= 10
0452 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0453 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0454 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0455
0456 hIoni: for kaon- XStype:3 SubType=2
0457 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0458 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0459 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0460 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0461 ICRU73QO : Emin= 0 eV Emax=1.05231 MeV deltaVI
0462 BetheBloch : Emin=1.05231 MeV Emax= 100 TeV deltaVI
0463
0464 hBrems: for kaon- XStype:1 SubType=3
0465 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0466 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0467 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0468 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0469 ===== Limit on energy threshold has been applied
0470
0471 hPairProd: for kaon- XStype:1 SubType=4
0472 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0473 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0474 Sampling table 18x1001 from 3.94942 GeV to 100 TeV
0475 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0476 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0477
0478 CoulombScat: for kaon- XStype:1 SubType=1 BuildTable=1
0479 Used Lambda table of kaon+
0480 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0481 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0482 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0483
0484 msc: for mu+ SubType= 10
0485 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0486 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0487 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0488
0489 muIoni: for mu+ XStype:3 SubType=2
0490 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0491 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0492 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0493 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0494 Bragg : Emin= 0 eV Emax= 200 keV deltaVI
0495 MuBetheBloch : Emin= 200 keV Emax= 100 TeV deltaVI
0496
0497 muBrems: for mu+ XStype:1 SubType=3
0498 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0499 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0500 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0501 MuBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0502 ===== Limit on energy threshold has been applied
0503
0504 muPairProd: for mu+ XStype:1 SubType=4
0505 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0506 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0507 Sampling table 21x1001 from 0.85 GeV to 100 TeV
0508 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0509 muPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0510
0511 CoulombScat: for mu+ XStype:1 SubType=1 BuildTable=1
0512 Lambda table from threshold to 100 TeV, 20 bins/decade, spline: 0
0513 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0514 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0515 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0516
0517 msc: for mu- SubType= 10
0518 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0519 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0520 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0521
0522 muIoni: for mu- XStype:3 SubType=2
0523 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0524 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0525 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0526 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0527 ICRU73QO : Emin= 0 eV Emax= 200 keV deltaVI
0528 MuBetheBloch : Emin= 200 keV Emax= 100 TeV deltaVI
0529
0530 muBrems: for mu- XStype:1 SubType=3
0531 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0532 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0533 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0534 MuBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0535 ===== Limit on energy threshold has been applied
0536
0537 muPairProd: for mu- XStype:1 SubType=4
0538 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0539 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0540 Sampling table 21x1001 from 0.85 GeV to 100 TeV
0541 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0542 muPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0543
0544 CoulombScat: for mu- XStype:1 SubType=1 BuildTable=1
0545 Used Lambda table of mu+
0546 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0547 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0548 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0549
0550 msc: for pi+ SubType= 10
0551 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0552 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0553 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0554
0555 hIoni: for pi+ XStype:3 SubType=2
0556 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0557 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0558 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0559 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0560 Bragg : Emin= 0 eV Emax=297.505 keV deltaVI
0561 BetheBloch : Emin=297.505 keV Emax= 100 TeV deltaVI
0562
0563 hBrems: for pi+ XStype:1 SubType=3
0564 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0565 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0566 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0567 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0568 ===== Limit on energy threshold has been applied
0569
0570 hPairProd: for pi+ XStype:1 SubType=4
0571 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0572 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0573 Sampling table 20x1001 from 1.11656 GeV to 100 TeV
0574 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0575 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0576
0577 CoulombScat: for pi+ XStype:1 SubType=1 BuildTable=1
0578 Lambda table from threshold to 100 TeV, 20 bins/decade, spline: 0
0579 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0580 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0581 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0582
0583 msc: for pi- SubType= 10
0584 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0585 WentzelVIUni : Emin= 0 eV Emax= 100 TeV Nbins=240 100 eV - 100 TeV
0586 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0587
0588 hIoni: for pi- XStype:3 SubType=2
0589 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0590 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0591 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0592 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0593 ICRU73QO : Emin= 0 eV Emax=297.505 keV deltaVI
0594 BetheBloch : Emin=297.505 keV Emax= 100 TeV deltaVI
0595
0596 hBrems: for pi- XStype:1 SubType=3
0597 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0598 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0599 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0600 hBrem : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0601 ===== Limit on energy threshold has been applied
0602
0603 hPairProd: for pi- XStype:1 SubType=4
0604 dE/dx and range tables from 100 eV to 100 TeV in 240 bins
0605 Lambda tables from threshold to 100 TeV, 20 bins/decade, spline: 1
0606 Sampling table 20x1001 from 1.11656 GeV to 100 TeV
0607 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0608 hPairProd : Emin= 0 eV Emax= 100 TeV ModifiedMephi
0609
0610 CoulombScat: for pi- XStype:1 SubType=1 BuildTable=1
0611 Used Lambda table of pi+
0612 ThetaMin(p) < Theta(degree) < 180, pLimit(GeV^1)= 0.139531
0613 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0614 eCoulombScattering : Emin= 0 eV Emax= 100 TeV
0615 G4VisManager: Using G4TrajectoryDrawByCharge as fallback trajectory model.
0616 See commands in /vis/modeling/trajectories/ for other options.
0617 End of tracking primary particle, its final energy is :3.47476 GeV
0618 Physics stage ends
0619 End of tracking primary particle, its final energy is :3.47537 GeV
0620 Physics stage ends
0621
0622 ======= The summary of simulation results 'neuron' ========
0623
0624 Primary particle = C12
0625 Kinetic energy of beam = 3480 A*MeV
0626 Particle traversals the neuron = 1 of 2
0627 Full LET of beam as formulas = 12.827 keV/um
0628 Mean LET of beam as simulation = 10.892 +- 0.31423 keV/um
0629 Mean track length of beam = 399.22 +- 0.0029698 um
0630 Particle fluence = 383.66 particles/cm^2
0631 Fluence dose (full) = 7.8848e-06 Gy
0632 Fluence dose ber beam = 3.9424e-06 Gy
0633
0634 List of generated physical process:
0635 eIoni= 3986
0636 ionIoni= 2469
0637 msc= 5330
0638
0639
0640 List of generated particles outside neuron structure:
0641 e- : 2997 Emean = 1.7843 keV ( 242.23 eV --> 434.14 keV) Eflow/event = 2.6738 MeV
0642
0643 Number of secondary particles inside neuron structure:
0644 e- : 14
0645
0646 Number of molecular products inside neuron structure:
0647 time: 1 ps - 10 ps
0648
0649 Total energy (MeV) deposition :
0650 All volume: 8.6967
0651 Bounding slice: 2.5219
0652 Neuron: 0.014207
0653 Soma: 0
0654 Dendrites: 0.014207
0655 Axon: 0
0656
0657 Number of compartments traversed by particle tracks :
0658 Soma: 0 of total: 3
0659 Dendrites: 3 of total: 2775
0660 Axon: 0 of total: 136
0661
0662
0663 Dendritic (or Axon) compartmental energy deposits
0664 at the distance from Soma have been written into *.out files:
0665 Dend3DEdep.out, Axon3DEdep.out, Soma3DEdep.out
0666 Outputs of energy deposition per event written in data file:
0667 OutputPerEvent.out
0668 Calculation time = 2.75533 s
0669
0670 Graphics systems deleted.
0671 Visualization Manager deleting...
