Warning, /geant4/examples/extended/medical/dna/moleculardna/moleculardna.out is written in an unsupported language. File is not indexed.
0001 Environment variable "G4FORCE_RUN_MANAGER_TYPE" enabled with value == Serial. Forcing G4RunManager type...
0002
0003 ############################################
0004 !!! WARNING - FPE detection is activated !!!
0005 ############################################
0006
0007
0008 ################################
0009 !!! G4Backtrace is activated !!!
0010 ################################
0011
0012
0013 **************************************************************
0014 Geant4 version Name: geant4-11-02-ref-06 (28-June-2024)
0015 Copyright : Geant4 Collaboration
0016 References : NIM A 506 (2003), 250-303
0017 : IEEE-TNS 53 (2006), 270-278
0018 : NIM A 835 (2016), 186-225
0019 WWW : http://geant4.org/
0020 **************************************************************
0021
0022 /dnageom/verbose 1
0023 /chem/activate true
0024 /scheduler/verbose 0
0025 /material/verbose 2
0026 /world/worldSize 10200 nm
0027 /cell/radiusSize 3 3 3 um
0028 /dnageom/setSmartVoxels 1
0029 /dnageom/checkOverlaps false
0030 /scheduler/endTime 1 us
0031 /dnageom/radicalKillDistance 9 nm
0032 /dnageom/interactionDirectRange 7 angstrom
0033 /dnageom/placementSize 30 30 100 nm
0034 /dnageom/fractalScaling 1 1 1 nm
0035 /dnageom/definitionFile geometries/prisms200k_r3000.txt
0036 /dnageom/placementVolume prism geometries/straight-216-0.txt
0037 /dnageom/setVoxelPlacementAnglesAsMultiplesOfPi false
0038 /dnageom/useCustomMoleculeSizes false
0039 /dnageom/drawCellVolumes false
0040 /dnageom/activateHistoneScavenging true
0041 /chromosome/add cylinder sphere 3000 0 0 0 nm
0042 /dnadamage/directDamageLower 17.5 eV
0043 /dnadamage/directDamageUpper 17.5 eV
0044 /dnadamage/indirectOHBaseChance 1.0
0045 /dnadamage/indirectOHStrandChance 0.65
0046 /dnadamage/inductionOHChance 0.0
0047 /dnadamage/indirectHBaseChance 1.0
0048 /dnadamage/indirectHStrandChance 0.65
0049 /dnadamage/inductionHChance 0.00
0050 /dnadamage/indirectEaqBaseChance 1.0
0051 /dnadamage/indirectEaqStrandChance 0.65
0052 /dnadamage/inductionEaqChance 0.00
0053 /analysisDNA/saveStrands false
0054 /analysisDNA/fragmentGap 0
0055 /run/initialize
0056 userDetector->Construct() start.
0057 G4NistMaterialBuilder::FindOrBuildMaterial G4_Galactic
0058 G4NistMaterialBuilder: BuildMaterial #286
0059 New material nComponents= 1
0060 G4Material: Mean excitation energy is changed for G4_Galactic Iold= 19.2eV Inew= 21.8 eV
0061 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0062 Loading Voxel: prism
0063 Histones placed per chromosome:
0064 Chromosome Histones
0065 -----------------------------------
0066 cylinder : 0
0067 Base Pairs placed per chromosome:
0068 Chromosome Base Pairs
0069 -----------------------------------
0070 cylinder : 43200216
0071 -------------------------------
0072 Name Vols EndNodes Max(vols/node)
0073 ----------------------------------------------
0074 prism 1296 5048 1
0075 -------------------------------------------
0076 world is registered to the default region.
0077 physicsList->Construct() start.
0078 --- G4CoupledTransportation is used
0079 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0080 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0081 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0082 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0083 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0084 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0085 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0086 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0087 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0088 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0089 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0090 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0091 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0092 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0093 G4NistMaterialBuilder::FindOrBuildMaterial G4_WATER
0094 physicsList->CheckParticleList() start.
0095 physicsList->setCut() start.
0096 /run/printProgress 100
0097 /gps/particle e-
0098 /gps/ang/type iso
0099 /gps/energy 4.5 keV
0100 /gps/pos/type Volume
0101 /gps/pos/shape Sphere
0102 /gps/pos/radius 500 nm
0103 /gps/pos/centre 0 0 0 nm
0104 /run/beamOn 2
0105 =======================================================================
0106 ====== Electromagnetic Physics Parameters ========
0107 =======================================================================
0108 LPM effect enabled 1
0109 Enable creation and use of sampling tables 0
0110 Apply cuts on all EM processes 0
0111 Use combined TransportationWithMsc Disabled
0112 Use general process 0
0113 Enable linear polarisation for gamma 0
0114 Enable photoeffect sampling below K-shell 1
0115 Enable sampling of quantum entanglement 0
0116 X-section factor for integral approach 0.8
0117 Min kinetic energy for tables 10 eV
0118 Max kinetic energy for tables 600 MeV
0119 Number of bins per decade of a table 20
0120 Verbose level 1
0121 Verbose level for worker thread 0
0122 Bremsstrahlung energy threshold above which
0123 primary e+- is added to the list of secondary 100 TeV
0124 Bremsstrahlung energy threshold above which primary
0125 muon/hadron is added to the list of secondary 100 TeV
0126 Lowest triplet kinetic energy 1 MeV
0127 Enable sampling of gamma linear polarisation 0
0128 5D gamma conversion model type 0
0129 5D gamma conversion model on isolated ion 0
0130 Livermore data directory epics_2017
0131 =======================================================================
0132 ====== Ionisation Parameters ========
0133 =======================================================================
0134 Step function for e+- (0.2, 0.01 mm)
0135 Step function for muons/hadrons (0.1, 0.05 mm)
0136 Step function for light ions (0.1, 0.02 mm)
0137 Step function for general ions (0.1, 0.001 mm)
0138 Lowest e+e- kinetic energy 0 eV
0139 Lowest muon/hadron kinetic energy 1 keV
0140 Use ICRU90 data 1
0141 Fluctuations of dE/dx are enabled 1
0142 Type of fluctuation model for leptons and hadrons Universal
0143 Use built-in Birks satuaration 0
0144 Build CSDA range enabled 0
0145 Use cut as a final range enabled 0
0146 Enable angular generator interface 1
0147 Max kinetic energy for CSDA tables 1 GeV
0148 Max kinetic energy for NIEL computation 0 eV
0149 Linear loss limit 0.01
0150 Read data from file for e+e- pair production by mu 0
0151 =======================================================================
0152 ====== Multiple Scattering Parameters ========
0153 =======================================================================
0154 Type of msc step limit algorithm for e+- 2
0155 Type of msc step limit algorithm for muons/hadrons 0
0156 Msc lateral displacement for e+- enabled 1
0157 Msc lateral displacement for muons and hadrons 0
0158 Urban msc model lateral displacement alg96 1
0159 Range factor for msc step limit for e+- 0.08
0160 Range factor for msc step limit for muons/hadrons 0.2
0161 Geometry factor for msc step limitation of e+- 2.5
0162 Safety factor for msc step limit for e+- 0.6
0163 Skin parameter for msc step limitation of e+- 3
0164 Lambda limit for msc step limit for e+- 1 mm
0165 Use Mott correction for e- scattering 1
0166 Factor used for dynamic computation of angular
0167 limit between single and multiple scattering 1
0168 Fixed angular limit between single
0169 and multiple scattering 3.1416 rad
0170 Upper energy limit for e+- multiple scattering 100 MeV
0171 Type of electron single scattering model 0
0172 Type of nuclear form-factor 1
0173 Screening factor 1
0174 =======================================================================
0175 ====== Atomic Deexcitation Parameters ========
0176 =======================================================================
0177 Fluorescence enabled 1
0178 Directory in G4LEDATA for fluorescence data files fluor
0179 Auger electron cascade enabled 1
0180 PIXE atomic de-excitation enabled 0
0181 De-excitation module ignores cuts 1
0182 Type of PIXE cross section for hadrons Empirical
0183 Type of PIXE cross section for e+- Livermore
0184 =======================================================================
0185 ====== DNA Physics Parameters ========
0186 =======================================================================
0187 Use fast sampling in DNA models 1
0188 Use Stationary option in DNA models 0
0189 Use DNA with multiple scattering of e- 0
0190 Use DNA e- solvation model type 11003
0191 =======================================================================
0192
0193 ### === Deexcitation model UAtomDeexcitation is activated for 1 region:
0194 DefaultRegionForTheWorld 1 1 0
0195 ### === Auger flag: 1
0196 ### === Ignore cuts flag: 1
0197
0198 phot: for gamma SubType=12 BuildTable=0
0199 LambdaPrime table from 200 keV to 600 MeV in 72 bins
0200 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0201 LivermorePhElectric : Emin= 0 eV Emax= 600 MeV SauterGavrila Fluo
0202
0203 compt: for gamma SubType=13 BuildTable=1
0204 Lambda table from 10 eV to 1 MeV, 21 bins/decade, spline: 1
0205 LambdaPrime table from 1 MeV to 600 MeV in 57 bins
0206 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0207 LowEPComptonModel : Emin= 0 eV Emax= 20 MeV Fluo
0208 KleinNishina : Emin= 20 MeV Emax= 600 MeV Fluo
0209
0210 conv: for gamma SubType=14 BuildTable=1
0211 Lambda table from 1.022 MeV to 600 MeV, 28 bins/decade, spline: 1
0212 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0213 BetheHeitlerLPM : Emin= 0 eV Emax= 600 MeV ModifiedTsai
0214
0215 Rayl: for gamma SubType=11 BuildTable=1
0216 Lambda table from 10 eV to 150 keV, 21 bins/decade, spline: 0
0217 LambdaPrime table from 150 keV to 600 MeV in 74 bins
0218 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0219 LivermoreRayleigh : Emin= 0 eV Emax= 600 MeV CullenGenerator
0220
0221 msc: for e- SubType= 10
0222 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0223 GoudsmitSaunderson : Emin= 1 MeV Emax= 600 MeV Nbins=60 1 MeV - 600 MeV
0224 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0225
0226 eIoni: for e- XStype:3 SubType=2
0227 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0228 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0229 StepFunction=(0.2, 0.01 mm), integ: 3, fluct: 1, linLossLim= 0.01
0230 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0231 MollerBhabha : Emin= 1 MeV Emax= 600 MeV deltaVI
0232
0233 eBrem: for e- XStype:4 SubType=3
0234 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0235 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0236 LPM flag: 1 for E > 0.6 GeV, VertexHighEnergyTh(GeV)= 100000
0237 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0238 eBremSB : Emin= 1 MeV Emax= 600 MeV AngularGen2BS
0239
0240 e-_G4DNAElectronSolvation: for e- SubType=58 BuildTable=0
0241 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0242 DNAOneStepThermalizationModel_Meesungnoen2002 : Emin= 0 eV Emax= 7.4 eV
0243 DummyModel : Emin= 7.4 eV Emax= 600 MeV
0244 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0245
0246 e-_G4DNAElastic: for e- SubType=51 BuildTable=0
0247 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0248 DNAChampionElasticModel : Emin= 0 eV Emax= 1 MeV
0249 DummyModel : Emin= 1 MeV Emax= 600 MeV
0250 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0251
0252 e-_G4DNAExcitation: for e- SubType=52 BuildTable=0
0253 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0254 DNABornExcitationModel : Emin= 0 eV Emax= 1 MeV
0255 DummyModel : Emin= 1 MeV Emax= 600 MeV
0256 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0257
0258 e-_G4DNAIonisation: for e- SubType=53 BuildTable=0
0259 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0260 DNABornIonisationModel : Emin= 0 eV Emax= 1 MeV deltaBorn Fluo
0261 DummyModel : Emin= 1 MeV Emax= 600 MeV
0262 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0263
0264 e-_G4DNAVibExcitation: for e- SubType=54 BuildTable=0
0265 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0266 DNASancheExcitationModel : Emin= 0 eV Emax= 100 eV
0267 DummyModel : Emin= 100 eV Emax= 600 MeV
0268 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0269
0270 e-_G4DNAAttachment: for e- SubType=55 BuildTable=0
0271 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0272 DNAMeltonAttachmentModel : Emin= 0 eV Emax= 13 eV
0273 DummyModel : Emin= 13 eV Emax= 600 MeV
0274 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0275
0276 msc: for e+ SubType= 10
0277 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0278 GoudsmitSaunderson : Emin= 0 eV Emax= 600 MeV Nbins=140 100 eV - 600 MeV
0279 StepLim=SafetyPlus Rfact=0.08 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=3 Llim=1 mm
0280
0281 eIoni: for e+ XStype:3 SubType=2
0282 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0283 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0284 StepFunction=(0.2, 0.01 mm), integ: 3, fluct: 1, linLossLim= 0.01
0285 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0286 MollerBhabha : Emin= 0 eV Emax= 600 MeV deltaVI
0287
0288 eBrem: for e+ XStype:4 SubType=3
0289 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0290 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0291 LPM flag: 1 for E > 0.6 GeV, VertexHighEnergyTh(GeV)= 100000
0292 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0293 eBremSB : Emin= 0 eV Emax= 600 MeV AngularGen2BS
0294
0295 annihil: for e+ XStype:2 SubType=5 AtRestModel:Allison BuildTable=0
0296 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0297 eplus2gg : Emin= 0 eV Emax= 600 MeV
0298
0299 msc: for proton SubType= 10
0300 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0301 UrbanMsc : Emin= 1 MeV Emax= 600 MeV Nbins=60 1 MeV - 600 MeV
0302 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0303
0304 hIoni: for proton XStype:3 SubType=2
0305 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0306 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0307 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0308 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0309 BetheBloch : Emin= 300 MeV Emax= 600 MeV deltaVI
0310
0311 proton_G4DNAElastic: for proton SubType=51 BuildTable=0
0312 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0313 DNAIonElasticModel : Emin= 0 eV Emax= 1 MeV
0314 DummyModel : Emin= 1 MeV Emax= 600 MeV
0315 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0316
0317 proton_G4DNAExcitation: for proton SubType=52 BuildTable=0
0318 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0319 DNAMillerGreenExcitationModel : Emin= 0 eV Emax= 500 keV
0320 DNABornExcitationModel : Emin= 500 keV Emax= 100 MeV
0321 DNARPWBAExcitationModel : Emin= 100 MeV Emax= 300 MeV
0322 DummyModel : Emin= 300 MeV Emax= 600 MeV
0323 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0324
0325 proton_G4DNAIonisation: for proton SubType=53 BuildTable=0
0326 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0327 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 500 keV deltaRudd Fluo
0328 DNABornIonisationModel : Emin= 500 keV Emax= 100 MeV deltaBorn Fluo
0329 DNARPWBAIonisationModel : Emin= 100 MeV Emax= 300 MeV deltaBorn Fluo
0330 DummyModel : Emin= 300 MeV Emax= 600 MeV
0331 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0332
0333 proton_G4DNAChargeDecrease: for proton SubType=56 BuildTable=0
0334 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0335 DNADingfelderChargeDecreaseModel : Emin= 0 eV Emax= 600 MeV
0336
0337 msc: for GenericIon SubType= 10
0338 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0339 UrbanMsc : Emin= 1 MeV Emax= 600 MeV
0340 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0341
0342 ionIoni: for GenericIon XStype:3 SubType=2
0343 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0344 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0345 StepFunction=(0.1, 0.001 mm), integ: 3, fluct: 1, linLossLim= 0.02
0346 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0347 BetheBloch : Emin= 300 MeV Emax= 600 MeV deltaVI
0348
0349 GenericIon_G4DNAIonisation: for GenericIon SubType=53 BuildTable=0
0350 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0351 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 300 MeV deltaRudd Fluo
0352 DummyModel : Emin= 300 MeV Emax= 600 MeV
0353 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0354
0355 nuclearStopping: for GenericIon SubType=8 BuildTable=0
0356 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0357 ICRU49NucStopping : Emin= 0 eV Emax= 1 MeV
0358 ======================================================================
0359 ====== Radioactive Decay Physics Parameters =======
0360 ======================================================================
0361 min MeanLife (from G4NuclideTable) 1 ns
0362 Max life time (from G4DeexPrecoParameters) 1000 ps
0363 Internal e- conversion flag 1
0364 Stored internal conversion coefficients 1
0365 Enabled atomic relaxation mode 1
0366 Enable correlated gamma emission 0
0367 Max 2J for sampling of angular correlations 10
0368 Atomic de-excitation enabled 1
0369 Auger electron emission enabled 1
0370 Check EM cuts disabled for atomic de-excitation 1
0371 Use Bearden atomic level energies 0
0372 Use ANSTO fluorescence model 0
0373 Threshold for very long decay time at rest 1 y
0374 ======================================================================
0375
0376 ====================================================================
0377 HADRONIC PROCESSES SUMMARY (verbose level 1)
0378 -------------------------------------------------------------------------
0379 Hadronic Processes for GenericIon
0380 Process: RadioactiveDecay
0381
0382 msc: for alpha SubType= 10
0383 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0384 UrbanMsc : Emin= 1 MeV Emax= 600 MeV
0385 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0386
0387 ionIoni: for alpha XStype:3 SubType=2
0388 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0389 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0390 StepFunction=(0.1, 0.02 mm), integ: 3, fluct: 1, linLossLim= 0.02
0391 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0392 BetheBloch : Emin= 300 MeV Emax= 600 MeV deltaVI
0393
0394 alpha_G4DNAElastic: for alpha SubType=51 BuildTable=0
0395 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0396 DNAIonElasticModel : Emin= 0 eV Emax= 1 MeV
0397 DummyModel : Emin= 1 MeV Emax= 600 MeV
0398 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0399
0400 alpha_G4DNAExcitation: for alpha SubType=52 BuildTable=0
0401 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0402 DNAMillerGreenExcitationModel : Emin= 0 eV Emax= 400 MeV
0403 DummyModel : Emin= 400 MeV Emax= 600 MeV
0404 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0405
0406 alpha_G4DNAIonisation: for alpha SubType=53 BuildTable=0
0407 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0408 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 400 MeV deltaRudd Fluo
0409 DummyModel : Emin= 400 MeV Emax= 600 MeV
0410 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0411
0412 alpha_G4DNAChargeDecrease: for alpha SubType=56 BuildTable=0
0413 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0414 DNADingfelderChargeDecreaseModel : Emin= 0 eV Emax= 600 MeV
0415
0416 msc: for alpha+ SubType= 10
0417 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0418 UrbanMsc : Emin= 1 MeV Emax= 600 MeV
0419 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0420
0421 hIoni: for alpha+ XStype:3 SubType=2
0422 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0423 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0424 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0425 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0426 BetheBloch : Emin= 300 MeV Emax= 600 MeV deltaVI
0427
0428 alpha+_G4DNAElastic: for alpha+ SubType=51 BuildTable=0
0429 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0430 DNAIonElasticModel : Emin= 0 eV Emax= 1 MeV
0431 DummyModel : Emin= 1 MeV Emax= 600 MeV
0432 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0433
0434 alpha+_G4DNAExcitation: for alpha+ SubType=52 BuildTable=0
0435 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0436 DNAMillerGreenExcitationModel : Emin= 0 eV Emax= 400 MeV
0437 DummyModel : Emin= 400 MeV Emax= 600 MeV
0438 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0439
0440 alpha+_G4DNAIonisation: for alpha+ SubType=53 BuildTable=0
0441 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0442 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 400 MeV deltaRudd Fluo
0443 DummyModel : Emin= 400 MeV Emax= 600 MeV
0444 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0445
0446 alpha+_G4DNAChargeIncrease: for alpha+ SubType=57 BuildTable=0
0447 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0448 DNADingfelderChargeIncreaseModel : Emin= 0 eV Emax= 600 MeV
0449
0450 alpha+_G4DNAChargeDecrease: for alpha+ SubType=56 BuildTable=0
0451 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0452 DNADingfelderChargeDecreaseModel : Emin= 0 eV Emax= 600 MeV
0453
0454 msc: for anti_proton SubType= 10
0455 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0456 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0457 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0458
0459 hIoni: for anti_proton XStype:3 SubType=2
0460 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0461 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0462 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0463 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0464 ICRU73QO : Emin= 0 eV Emax= 2 MeV deltaVI
0465 BetheBloch : Emin= 2 MeV Emax= 600 MeV deltaVI
0466
0467 helium_G4DNAElastic: for helium SubType=51 BuildTable=0
0468 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0469 DNAIonElasticModel : Emin= 0 eV Emax= 1 MeV
0470 DummyModel : Emin= 1 MeV Emax= 600 MeV
0471 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0472
0473 helium_G4DNAExcitation: for helium SubType=52 BuildTable=0
0474 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0475 DNAMillerGreenExcitationModel : Emin= 0 eV Emax= 400 MeV
0476 DummyModel : Emin= 400 MeV Emax= 600 MeV
0477 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0478
0479 helium_G4DNAIonisation: for helium SubType=53 BuildTable=0
0480 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0481 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 400 MeV deltaRudd Fluo
0482 DummyModel : Emin= 400 MeV Emax= 600 MeV
0483 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0484
0485 helium_G4DNAChargeIncrease: for helium SubType=57 BuildTable=0
0486 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0487 DNADingfelderChargeIncreaseModel : Emin= 0 eV Emax= 600 MeV
0488
0489 hydrogen_G4DNAElastic: for hydrogen SubType=51 BuildTable=0
0490 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0491 DNAIonElasticModel : Emin= 0 eV Emax= 1 MeV
0492 DummyModel : Emin= 1 MeV Emax= 600 MeV
0493 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0494
0495 hydrogen_G4DNAExcitation: for hydrogen SubType=52 BuildTable=0
0496 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0497 DNAMillerGreenExcitationModel : Emin= 0 eV Emax= 300 MeV
0498 DummyModel : Emin= 300 MeV Emax= 600 MeV
0499 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0500
0501 hydrogen_G4DNAIonisation: for hydrogen SubType=53 BuildTable=0
0502 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0503 DNARuddIonisationExtendedModel : Emin= 0 eV Emax= 300 MeV deltaRudd Fluo
0504 DummyModel : Emin= 300 MeV Emax= 600 MeV
0505 StepLim=UseSafety Rfact=0.04 Gfact=2.5 Sfact=0.6 DispFlag:1 Skin=1 Llim=1 mm
0506
0507 hydrogen_G4DNAChargeIncrease: for hydrogen SubType=57 BuildTable=0
0508 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0509 DNADingfelderChargeIncreaseModel : Emin= 0 eV Emax= 600 MeV
0510
0511 msc: for kaon+ SubType= 10
0512 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0513 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0514 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0515
0516 hIoni: for kaon+ XStype:3 SubType=2
0517 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0518 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0519 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0520 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0521 Bragg : Emin= 0 eV Emax=1.05231 MeV deltaVI
0522 BetheBloch : Emin=1.05231 MeV Emax= 600 MeV deltaVI
0523
0524 msc: for kaon- SubType= 10
0525 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0526 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0527 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0528
0529 hIoni: for kaon- XStype:3 SubType=2
0530 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0531 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0532 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0533 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0534 ICRU73QO : Emin= 0 eV Emax=1.05231 MeV deltaVI
0535 BetheBloch : Emin=1.05231 MeV Emax= 600 MeV deltaVI
0536
0537 msc: for mu+ SubType= 10
0538 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0539 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0540 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0541
0542 hIoni: for mu+ XStype:3 SubType=2
0543 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0544 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0545 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0546 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0547 Bragg : Emin= 0 eV Emax=225.219 keV deltaVI
0548 BetheBloch : Emin=225.219 keV Emax= 600 MeV deltaVI
0549
0550 msc: for mu- SubType= 10
0551 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0552 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0553 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0554
0555 hIoni: for mu- XStype:3 SubType=2
0556 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0557 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0558 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0559 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0560 ICRU73QO : Emin= 0 eV Emax=225.219 keV deltaVI
0561 BetheBloch : Emin=225.219 keV Emax= 600 MeV deltaVI
0562
0563 msc: for pi+ SubType= 10
0564 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0565 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0566 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0567
0568 hIoni: for pi+ XStype:3 SubType=2
0569 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0570 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0571 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0572 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0573 Bragg : Emin= 0 eV Emax=297.505 keV deltaVI
0574 BetheBloch : Emin=297.505 keV Emax= 600 MeV deltaVI
0575
0576 msc: for pi- SubType= 10
0577 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0578 WentzelVIUni : Emin= 0 eV Emax= 600 MeV
0579 StepLim=Minimal Rfact=0.2 Gfact=2.5 Sfact=0.6 DispFlag:0 Skin=3 Llim=1 mm
0580
0581 hIoni: for pi- XStype:3 SubType=2
0582 dE/dx and range tables from 10 eV to 600 MeV in 160 bins
0583 Lambda tables from threshold to 600 MeV, 20 bins/decade, spline: 1
0584 StepFunction=(0.1, 0.05 mm), integ: 3, fluct: 1, linLossLim= 0.01
0585 ===== EM models for the G4Region DefaultRegionForTheWorld ======
0586 ICRU73QO : Emin= 0 eV Emax=297.505 keV deltaVI
0587 BetheBloch : Emin=297.505 keV Emax= 600 MeV deltaVI
0588
0589 Region <DefaultRegionForTheWorld> -- -- appears in <world> world volume
0590 This region is in the mass world.
0591 Root logical volume(s) : world
0592 Pointers : G4VUserRegionInformation[0], G4UserLimits[0], G4FastSimulationManager[0], G4UserSteppingAction[0]
0593 Materials : G4_Galactic G4_WATER
0594 Production cuts : gamma 1 um e- 1 um e+ 1 um proton 1 um
0595
0596 Region <DefaultRegionForParallelWorld> -- -- is not associated to any world.
0597 Root logical volume(s) :
0598 Pointers : G4VUserRegionInformation[0], G4UserLimits[0], G4FastSimulationManager[0], G4UserSteppingAction[0]
0599 Materials :
0600 Production cuts : gamma 1 um e- 1 um e+ 1 um proton 1 um
0601
0602 ========= Table of registered couples ============================
0603
0604 Index : 0 used in the geometry : Yes
0605 Material : G4_Galactic
0606 Range cuts : gamma 1 um e- 1 um e+ 1 um proton 1 um
0607 Energy thresholds : gamma 100 eV e- 100 eV e+ 100 eV proton 100 eV
0608 Region(s) which use this couple :
0609 DefaultRegionForTheWorld
0610
0611 Index : 1 used in the geometry : Yes
0612 Material : G4_WATER
0613 Range cuts : gamma 1 um e- 1 um e+ 1 um proton 1 um
0614 Energy thresholds : gamma 100 eV e- 242.143 eV e+ 239.346 eV proton 100 eV
0615 Region(s) which use this couple :
0616 DefaultRegionForTheWorld
0617
0618 ==================================================================
0619
0620 Start closing geometry.
0621 G4GeometryManager::ReportVoxelStats -- Voxel Statistics
0622
0623 Total memory consumed for geometry optimisation: 84655 kByte
0624 Total CPU time elapsed for geometry optimisation: 48.87 seconds
0625
0626 Voxelisation: top CPU users:
0627 Percent Total CPU System CPU Memory Volume
0628 ------- ---------- ---------- -------- ----------
0629 50.83 24.84 0.10 42138k DNAPhysLV
0630 49.01 23.95 0.12 42138k CellLogical
0631 0.06 0.03 0.00 380k prism
0632
0633 Voxelisation: top memory users:
0634 Percent Memory Heads Nodes Pointers Total CPU Volume
0635 ------- -------- ------ ------ -------- ---------- ----------
0636 49.78 42137k 311671 314256 703064 24.84 DNAPhysLV
0637 49.78 42137k 311671 314256 703064 23.95 CellLogical
0638 0.45 379k 1273 3780 14482 0.03 prism
0639 ### Run 0 starts.
0640 AnalysisManager::Initialize() GetRunID : 0
0641 ... set ntuple merging row mode : row-wise - done
0642 ... create file : molecular-dna.root - done
0643 ... open analysis file : molecular-dna.root - done
0644 ... open analysis file : molecular-dna.root - done
0645 --> Event 0 starts.
0646
0647 DNAIndependentReactionTimeModel will be used ==========================
0648
0649 =======================================================================
0650
0651 Run terminated.
0652 Run Summary
0653 Number of events processed : 2
0654 User=0.520000s Real=0.529984s Sys=0.010000s
0655 ... write file : molecular-dna.root - done
0656 ... close file : molecular-dna.root - done
0657 G4 kernel has come to Quit state.
0658 Deleting G4Run (id:0)
0659 UserDetectorConstruction deleted 0x15b8300
0660 UserPhysicsList deleted 0x15fd560
0661 UserActionInitialization deleted 0x1634640
0662 UserWorkerInitialization deleted 0
0663 UserWorkerThreadInitialization deleted 0
0664 UserRunAction deleted.
0665 UserPrimaryGenerator deleted.
0666 RunManager is deleting RunManagerKernel.
0667 G4SDManager deleted.
0668 EventManager deleted.
0669 Units table cleared.
0670 TransportationManager deleted.
0671 Total navigation history collections cleaned: 1080
0672 G4RNGHelper object is deleted.
0673 ================== Deleting memory pools ===================
0674 Pool ID '20G4NavigationLevelRep', size : 0.958 MB
0675 Pool ID '19G4ElectronOccupancy', size : 0.000961 MB
0676 Pool ID '24G4ReferenceCountedHandleIvE', size : 0.000961 MB
0677 Pool ID '7G4Event', size : 0.000961 MB
0678 Pool ID '15G4PrimaryVertex', size : 0.000961 MB
0679 Pool ID '17G4PrimaryParticle', size : 0.000961 MB
0680 Pool ID '13ChromosomeHit', size : 0.000961 MB
0681 Pool ID '17G4DynamicParticle', size : 0.126 MB
0682 Pool ID '7G4Track', size : 0.252 MB
0683 Pool ID '18G4TouchableHistory', size : 0.0654 MB
0684 Pool ID '15G4CountedObjectIvE', size : 0.0317 MB
0685 Pool ID '10G4Molecule', size : 0.0759 MB
0686 Pool ID '8G4OctreeI19G4FastList_iteratorI7G4TrackE9ExtractorI10G4FastListIS1_EEN5CLHEP10Hep3VectorEE', size : 0.000961 MB
0687 Number of memory pools allocated: 13 of which, static: 0
0688 Dynamic pools deleted: 13 / Total memory freed: 1.5 MB
0689 ============================================================
0690 G4Allocator objects are deleted.
0691 UImanager deleted.
0692 StateManager deleted.
0693 RunManagerKernel is deleted. Good bye :)
0694 RunManager is deleted.
