moleculardna/include/ChromosomeMapper.hh

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0026 //
0027 #ifndef MOLECULAR_CHROMOSOME_MAPPER_HH
0028 #define MOLECULAR_CHROMOSOME_MAPPER_HH
0029
0030 #include "ChromosomeFactory.hh"
0031
0032 #include "G4ThreeVector.hh"
0033 #include "globals.hh"
0034
0035 #include <map>
0036 #include <vector>
0037
0038 class VirtualChromosome;
0039
0040 class ChromosomeMessenger;
0041
0042 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0043
0044 class ChromosomeMapper
0045 {
0046   public:
0047     ChromosomeMapper();
0048
0049     virtual ~ChromosomeMapper();
0050
0051     [[maybe_unused]] VirtualChromosome* GetChromosome(const G4String&) const;
0052
0053     [[maybe_unused]] VirtualChromosome* GetChromosome(const G4ThreeVector& p) const;
0054
0055     [[maybe_unused]] G4String GetCurrentChromosomeKey(const G4ThreeVector&) const;
0056
0057     [[maybe_unused]] std::vector<G4String> GetChromosomeKeys() const;
0058
0059     inline G4int GetNumberOfChromosomes() { return (G4int)fChromosomes.size(); };
0060
0061     void AddChromosome(const G4String&, const std::vector<G4String>&);
0062
0063     void Test();
0064
0065     void SavePlotData(const G4String& filename);
0066
0067   private:
0068     std::map<uint32_t, VirtualChromosome*> fChromosomes;
0069     ChromosomeMessenger* fpChromosomeMessenger;
0070     ChromosomeFactory* fpChromosomeFactory;
0071 };
0072
0073 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0074
0075 #endif  // MOLECULAR_CHROMOSOME_MAPPER_HH