dnadamage2/src/Run.cc

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
0004 // *                                                                  *
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0006 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
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0017 // *                                                                  *
0018 // * This  code  implementation is the result of  the  scientific and *
0019 // * technical work of the GEANT4 collaboration.                      *
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0023 // * acceptance of all terms of the Geant4 Software license.          *
0024 // ********************************************************************
0025 //
0026 // This example is provided by the Geant4-DNA collaboration
0027 // dnadamage3 example is derived from the chem6 example
0028 // chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
0029 //
0030 // Any report or published results obtained using the Geant4-DNA software
0031 // shall cite the following Geant4-DNA collaboration publication:
0032 // J. Appl. Phys. 125 (2019) 104301
0033 // Med. Phys. 45 (2018) e722-e739
0034 // J. Comput. Phys. 274 (2014) 841-882
0035 // Med. Phys. 37 (2010) 4692-4708
0036 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
0037 // The Geant4-DNA web site is available at http://geant4-dna.org
0038 //
0039 // Authors: J. Naoki D. Kondo (UCSF, US)
0040 //          J. Ramos-Mendez and B. Faddegon (UCSF, US)
0041 //
0042 /// \file Run.cc
0043 /// \brief Implementation of the Run class
0044
0045 #include "Run.hh"
0046
0047 #include "RunAction.hh"
0048 #include "ScoreSpecies.hh"
0049
0050 #include "G4Event.hh"
0051 #include "G4HCofThisEvent.hh"
0052 #include "G4RunManager.hh"
0053 #include "G4SDManager.hh"
0054 #include "G4SystemOfUnits.hh"
0055 #include "G4THitsMap.hh"
0056 #include "G4VSensitiveDetector.hh"
0057
0058 #include <map>
0059 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0060
0061 Run::Run() : G4Run()
0062 {
0063   G4MultiFunctionalDetector* mfdet = dynamic_cast<G4MultiFunctionalDetector*>(
0064     G4SDManager::GetSDMpointer()->FindSensitiveDetector("mfDetector"));
0065   G4int CollectionIDspecies = G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/Species");
0066   G4int CollectionIDLET = G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/LET");
0067   G4int CollectionSB = G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/StrandBreaks");
0068
0069   fTotalLET = new G4THitsMap<G4double>("mfDetector", "LET");
0070   fScorerRun = mfdet->GetPrimitive(CollectionIDspecies);
0071   fLETScorerRun = mfdet->GetPrimitive(CollectionIDLET);
0072   fStrandBreakRun = mfdet->GetPrimitive(CollectionSB);
0073 }
0074
0075 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0076
0077 void Run::RecordEvent(const G4Event* event)
0078 {
0079   if (event->IsAborted()) return;
0080
0081   G4int CollectionID = G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/Species");
0082
0083   G4int CollectionIDLET = G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/LET");
0084
0085   // Hits collections
0086   //
0087   G4HCofThisEvent* HCE = event->GetHCofThisEvent();
0088   if (!HCE) return;
0089
0090   G4THitsMap<G4double>* evtMap = static_cast<G4THitsMap<G4double>*>(HCE->GetHC(CollectionID));
0091
0092   G4THitsMap<G4double>* evtLET = static_cast<G4THitsMap<G4double>*>(HCE->GetHC(CollectionIDLET));
0093
0094   G4int nOfMap = evtLET->entries();
0095
0096   G4int nOftotal = fTotalLET->entries();
0097
0098   for (G4int i = 0; i < nOfMap; i++) {
0099     G4double* LET = (*evtLET)[i];
0100     if (!LET) continue;
0101     fTotalLET->add(nOftotal + i, *LET);
0102   }
0103
0104   std::map<G4int, G4double*>::iterator itr;
0105
0106   for (itr = evtMap->GetMap()->begin(); itr != evtMap->GetMap()->end(); itr++) {
0107     G4double edep = *(itr->second);
0108     fSumEne += edep;
0109   }
0110
0111   G4Run::RecordEvent(event);
0112 }
0113
0114 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0115
0116 void Run::Merge(const G4Run* aRun)
0117 {
0118   if (aRun == this) {
0119     return;
0120   }
0121
0122   const Run* localRun = static_cast<const Run*>(aRun);
0123   fSumEne += localRun->fSumEne;
0124
0125   G4int nOfMaster = fTotalLET->entries();
0126   G4int nOfLocal = localRun->fTotalLET->entries();
0127   for (G4int i = 0; i < nOfLocal; i++) {
0128     G4double* LET = (*localRun->fTotalLET)[i];
0129     if (!LET) continue;
0130     fTotalLET->add(nOfMaster + i, *LET);
0131   }
0132
0133   ScoreSpecies* masterSpeciesScorer = dynamic_cast<ScoreSpecies*>(this->fScorerRun);
0134
0135   ScoreSpecies* localSpeciesScorer = dynamic_cast<ScoreSpecies*>(localRun->fScorerRun);
0136
0137   masterSpeciesScorer->AbsorbResultsFromWorkerScorer(localSpeciesScorer);
0138
0139   ScoreStrandBreaks* masterSBScorer = dynamic_cast<ScoreStrandBreaks*>(this->fStrandBreakRun);
0140
0141   ScoreStrandBreaks* localSBScorer = dynamic_cast<ScoreStrandBreaks*>(localRun->fStrandBreakRun);
0142
0143   masterSBScorer->AbsorbResultsFromWorkerScorer(localSBScorer);
0144
0145   G4Run::Merge(aRun);
0146 }
0147
0148 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....