dnadamage2/src/ActionInitialization.cc

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
0004 // *                                                                  *
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0006 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
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0019 // * technical work of the GEANT4 collaboration.                      *
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0023 // * acceptance of all terms of the Geant4 Software license.          *
0024 // ********************************************************************
0025 //
0026 // This example is provided by the Geant4-DNA collaboration
0027 // dnadamage3 example is derived from the chem6 example
0028 // chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
0029 //
0030 // Any report or published results obtained using the Geant4-DNA software
0031 // shall cite the following Geant4-DNA collaboration publication:
0032 // J. Appl. Phys. 125 (2019) 104301
0033 // Med. Phys. 45 (2018) e722-e739
0034 // J. Comput. Phys. 274 (2014) 841-882
0035 // Med. Phys. 37 (2010) 4692-4708
0036 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
0037 // The Geant4-DNA web site is available at http://geant4-dna.org
0038 //
0039 // Authors: J. Naoki D. Kondo (UCSF, US)
0040 //          J. Ramos-Mendez and B. Faddegon (UCSF, US)
0041 //
0042 /// \file ActionInitialization.cc
0043 /// \brief Implementation of the ActionInitialization class
0044
0045 #include "ActionInitialization.hh"
0046
0047 #include "PrimaryGeneratorAction.hh"
0048 #include "RunAction.hh"
0049 #include "StackingAction.hh"
0050 #include "TimeStepAction.hh"
0051
0052 #include "G4DNAChemistryManager.hh"
0053 #include "G4H2O.hh"
0054 #include "G4MoleculeCounter.hh"
0055 #include "G4Scheduler.hh"
0056 #include "EventAction.hh"
0057
0058 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0059
0060 ActionInitialization::ActionInitialization() : G4VUserActionInitialization() {}
0061
0062 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0063
0064 void ActionInitialization::BuildForMaster() const
0065 {
0066   SetUserAction(new RunAction());
0067 }
0068
0069 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0070
0071 void ActionInitialization::Build() const
0072 {
0073   SetUserAction(new PrimaryGeneratorAction());
0074   SetUserAction(new RunAction());
0075   SetUserAction(new StackingAction());
0076   SetUserAction(new EventAction());
0077   G4Scheduler::Instance()->SetUserAction(new TimeStepAction());
0078   BuildMoleculeCounters();
0079 }
0080
0081 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0082
0083 void ActionInitialization::BuildMoleculeCounters() const
0084 {
0085   G4MoleculeCounterManager::Instance()->SetResetCountersBeforeEvent(true);
0086   G4MoleculeCounterManager::Instance()->SetResetCountersBeforeRun(true);
0087   G4MoleculeCounterManager::Instance()->SetAccumulateCounterIntoMaster(false);
0088
0089   auto counter = std::make_unique<G4MoleculeCounter>();
0090   counter->SetTimeComparer(G4MoleculeCounterTimeComparer::CreateWithFixedPrecision(1 * ps));
0091   counter->IgnoreMolecule(G4H2O::Definition());
0092   G4MoleculeCounterManager::Instance()->RegisterCounter(std::move(counter));
0093 }
0094
0095 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....