dnadamage2/src/ActionInitialization.cc

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
0004 // *                                                                  *
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0006 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
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0024 // ********************************************************************
0025 //
0026 /// \file ActionInitialization.cc
0027 /// \brief Implementation of the ActionInitialization class
0028
0029 // This example is provided by the Geant4-DNA collaboration
0030 // dnadamage3 example is derived from the chem6 example
0031 // chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
0032 //
0033 // Any report or published results obtained using the Geant4-DNA software
0034 // shall cite the following Geant4-DNA collaboration publication:
0035 // J. Appl. Phys. 125 (2019) 104301
0036 // Med. Phys. 45 (2018) e722-e739
0037 // J. Comput. Phys. 274 (2014) 841-882
0038 // Med. Phys. 37 (2010) 4692-4708
0039 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
0040 // The Geant4-DNA web site is available at http://geant4-dna.org
0041 //
0042 // Authors: J. Naoki D. Kondo (UCSF, US)
0043 //          J. Ramos-Mendez and B. Faddegon (UCSF, US)
0044 //
0045
0046 #include "ActionInitialization.hh"
0047
0048 #include "PrimaryGeneratorAction.hh"
0049 #include "RunAction.hh"
0050 #include "StackingAction.hh"
0051 #include "TimeStepAction.hh"
0052
0053 #include "G4DNAChemistryManager.hh"
0054 #include "G4H2O.hh"
0055 #include "G4MoleculeCounter.hh"
0056 #include "G4Scheduler.hh"
0057 #include "EventAction.hh"
0058 #include "G4SystemOfUnits.hh"
0059
0060 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0061
0062 ActionInitialization::ActionInitialization() : G4VUserActionInitialization() {}
0063
0064 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0065
0066 void ActionInitialization::BuildForMaster() const
0067 {
0068   SetUserAction(new RunAction());
0069 }
0070
0071 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0072
0073 void ActionInitialization::Build() const
0074 {
0075   SetUserAction(new PrimaryGeneratorAction());
0076   SetUserAction(new RunAction());
0077   SetUserAction(new StackingAction());
0078   SetUserAction(new EventAction());
0079   G4Scheduler::Instance()->SetUserAction(new TimeStepAction());
0080   BuildMoleculeCounters();
0081 }
0082
0083 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0084
0085 void ActionInitialization::BuildMoleculeCounters() const
0086 {
0087   G4MoleculeCounterManager::Instance()->SetResetCountersBeforeEvent(true);
0088   G4MoleculeCounterManager::Instance()->SetResetCountersBeforeRun(true);
0089   G4MoleculeCounterManager::Instance()->SetAccumulateCounterIntoMaster(false);
0090
0091   auto counter = std::make_unique<G4MoleculeCounter>();
0092   counter->SetTimeComparer(G4MoleculeCounterTimeComparer::CreateWithFixedPrecision(1 * ps));
0093   counter->IgnoreMolecule(G4H2O::Definition());
0094   G4MoleculeCounterManager::Instance()->RegisterCounter(std::move(counter));
0095 }
0096
0097 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....