dnadamage2/include/PlasmidMolecules.hh

0001 //
0002 // ********************************************************************
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0024 // ********************************************************************
0025 //
0026 /// \file PlasmidMolecules.hh
0027 /// \brief Definition of the PlasmidMolecules class
0028 ///
0029 /// Definition of the additional Plasmid DNA molecules
0030
0031 // This example is provided by the Geant4-DNA collaboration
0032 // DNADAMAGE2 example is derived from the chem6 example
0033 // chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
0034 //
0035 // The code is developed in the framework of the ESA AO7146
0036 //
0037 // We would be very happy hearing from you, send us your feedback! :)
0038 //
0039 // In order for Geant4-DNA to be maintained and still open-source,
0040 // article citations are crucial.
0041 // If you use Geant4-DNA chemistry and you publish papers about your software,
0042 // in addition to the general paper on Geant4-DNA:
0043 //
0044 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
0045 //
0046 // we would be very happy if you could please also cite the following
0047 // reference papers on chemistry:
0048 //
0049 // Authors: J. Naoki D. Kondo (UCSF, US)
0050 //      J. Ramos-Mendez and B. Faddegon (UCSF, US)
0051 //
0052 // J. Comput. Phys. 274 (2014) 841-882
0053 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508
0054 //
0055
0056 #ifndef DNADAMAGE2_PlasmidMolecules_h
0057 #define DNADAMAGE2_PlasmidMolecules_h 1
0058
0059 #include "G4MoleculeDefinition.hh"
0060 #include "G4ParticleDefinition.hh"
0061 #include "G4ios.hh"
0062 #include "globals.hh"
0063
0064 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0065
0066 class G4DNA_Deoxyribose : public G4MoleculeDefinition
0067 {
0068   private:
0069     static /*G4ThreadLocal*/ G4DNA_Deoxyribose* fDeoxyriboseInstance;
0070     G4DNA_Deoxyribose() {}
0071     ~G4DNA_Deoxyribose() override = default;
0072
0073   public:
0074     static G4DNA_Deoxyribose* Definition();
0075 };
0076
0077 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0078
0079 class G4DNA_DamagedDeoxyriboseOH : public G4MoleculeDefinition
0080 {
0081   private:
0082     static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseOH* fDamagedDeoxyriboseOHInstance;
0083     G4DNA_DamagedDeoxyriboseOH() {}
0084     ~G4DNA_DamagedDeoxyriboseOH() override = default;
0085
0086   public:
0087     static G4DNA_DamagedDeoxyriboseOH* Definition();
0088 };
0089
0090 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0091
0092 class G4DNA_DamagedDeoxyriboseH : public G4MoleculeDefinition
0093 {
0094   private:
0095     static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseH* fDamagedDeoxyriboseHInstance;
0096     G4DNA_DamagedDeoxyriboseH() {}
0097     ~G4DNA_DamagedDeoxyriboseH() override = default;
0098
0099   public:
0100     static G4DNA_DamagedDeoxyriboseH* Definition();
0101 };
0102
0103 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0104
0105 class G4DNA_DamagedDeoxyriboseEAQ : public G4MoleculeDefinition
0106 {
0107   private:
0108     static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseEAQ* fDamagedDeoxyriboseEAQInstance;
0109     G4DNA_DamagedDeoxyriboseEAQ() {}
0110     ~G4DNA_DamagedDeoxyriboseEAQ() override = default;
0111
0112   public:
0113     static G4DNA_DamagedDeoxyriboseEAQ* Definition();
0114 };
0115
0116 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0117
0118 #endif