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File indexing completed on 2025-02-23 09:21:52
0001 // 0002 // ******************************************************************** 0003 // * License and Disclaimer * 0004 // * * 0005 // * The Geant4 software is copyright of the Copyright Holders of * 0006 // * the Geant4 Collaboration. It is provided under the terms and * 0007 // * conditions of the Geant4 Software License, included in the file * 0008 // * LICENSE and available at http://cern.ch/geant4/license . These * 0009 // * include a list of copyright holders. * 0010 // * * 0011 // * Neither the authors of this software system, nor their employing * 0012 // * institutes,nor the agencies providing financial support for this * 0013 // * work make any representation or warranty, express or implied, * 0014 // * regarding this software system or assume any liability for its * 0015 // * use. Please see the license in the file LICENSE and URL above * 0016 // * for the full disclaimer and the limitation of liability. * 0017 // * * 0018 // * This code implementation is the result of the scientific and * 0019 // * technical work of the GEANT4 collaboration. * 0020 // * By using, copying, modifying or distributing the software (or * 0021 // * any work based on the software) you agree to acknowledge its * 0022 // * use in resulting scientific publications, and indicate your * 0023 // * acceptance of all terms of the Geant4 Software license. * 0024 // ******************************************************************** 0025 // 0026 /// \file G4EmDNAChemistryForPlasmids.hh 0027 /// \brief Definition of the Chemistry parameters with DNA reactions 0028 /* 0029 * G4EmDNAChemistryForPlasmids.hh 0030 * 0031 * Created on: Feb 10, 2021 0032 * Author: J. Naoki D. Kondo 0033 * W. G. Shin, J. Ramos-Mendez and B. Faddegon 0034 */ 0035 0036 #ifndef DNADAMAGE2_ChemistryForPlasmids_hh 0037 #define DNADAMAGE2_ChemistryForPlasmids_hh 1 0038 0039 #include "G4UIcmdWithADouble.hh" 0040 #include "G4VPhysicsConstructor.hh" 0041 #include "G4VUserChemistryList.hh" 0042 #include "globals.hh" 0043 0044 #include <G4UImessenger.hh> 0045 0046 class G4DNAMolecularReactionTable; 0047 0048 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 0049 0050 class G4EmDNAChemistryForPlasmids : public G4VUserChemistryList, public G4VPhysicsConstructor 0051 { 0052 public: 0053 G4EmDNAChemistryForPlasmids(); 0054 G4EmDNAChemistryForPlasmids(G4double, G4double); 0055 ~G4EmDNAChemistryForPlasmids() override = default; 0056 0057 void ConstructParticle() override { ConstructMolecule(); } 0058 0059 void ConstructMolecule() override; 0060 void ConstructProcess() override; 0061 0062 void ConstructDissociationChannels() override; 0063 void ConstructReactionTable(G4DNAMolecularReactionTable*) override; 0064 void ConstructTimeStepModel(G4DNAMolecularReactionTable*) override; 0065 0066 void DeclareDMSOAndDNAReactions(G4DNAMolecularReactionTable*); 0067 void DeclareOxygenReactions(G4DNAMolecularReactionTable*); 0068 0069 private: 0070 G4double fDMSO = 1E-4; 0071 G4double fOxygen = 0.25E-3; 0072 0073 // G4DNAMolecularReactionTable* fReactionTable = nullptr; 0074 }; 0075 0076 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 0077 0078 #endif
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