dna/dnadamage2/dnadamage2.cc

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
0004 // *                                                                  *
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0006 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
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0024 // ********************************************************************
0025 //
0026 /// \file dnadamage2.cc
0027 /// \brief Main program of the dna/dnadamage2 example
0028
0029 // This example is provided by the Geant4-DNA collaboration
0030 // chem6 example is derived from chem4 and chem5 examples
0031 //
0032 // Any report or published results obtained using the Geant4-DNA software
0033 // shall cite the following Geant4-DNA collaboration publication:
0034 // J. Appl. Phys. 125 (2019) 104301
0035 // Med. Phys. 45 (2018) e722-e739
0036 // J. Comput. Phys. 274 (2014) 841-882
0037 // Med. Phys. 37 (2010) 4692-4708
0038 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
0039 // The Geant4-DNA web site is available at http://geant4-dna.org
0040 //
0041 // Authors: J. Naoki D. Kondo (UCSF, US)
0042 //          Jose Ramos-Mendez and Bruce Faddegon (UCSF, US)
0043 //
0044
0045 #include "ActionInitialization.hh"
0046 #include "DetectorConstruction.hh"
0047 #include "PhysicsList.hh"
0048
0049 #include "G4DNAChemistryManager.hh"
0050 #include "G4RunManagerFactory.hh"
0051 #include "G4UIExecutive.hh"
0052 #include "G4UImanager.hh"
0053 #include "G4VisExecutive.hh"
0054
0055 /*
0056  * WARNING : Geant4 was initially not intended for this kind of application
0057  * This code is delivered as a prototype
0058  * We will be happy to hear from you, do not hesitate to send your feedback
0059  * and communicate on the difficulties you may encounter
0060  * The user interface may change in the next releases since a reiteration of
0061  * the code has started
0062  */
0063
0064 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
0065
0066 int main(int argc, char** argv)
0067 {
0068   // Detect interactive mode (if no arguments) and define UI session
0069   //
0070   G4UIExecutive* ui = nullptr;
0071   if (argc == 1)
0072   {
0073     ui = new G4UIExecutive(argc, argv);
0074   }
0075
0076   // Optionally: choose a different Random engine...
0077   // G4Random::setTheEngine(new CLHEP::MTwistEngine);
0078   G4long fSeed = 1234;
0079
0080   // Construct the default run manager
0081   //
0082   auto runManager = G4RunManagerFactory::CreateRunManager();
0083
0084   // Set mandatory initialization classes
0085   //
0086   auto fpDetector = new DetectorConstruction();
0087   auto fpActionIni = new ActionInitialization();
0088   auto fpPhysicsList = new PhysicsList();
0089
0090   runManager->SetUserInitialization(fpDetector);
0091   runManager->SetUserInitialization(fpPhysicsList);
0092   runManager->SetUserInitialization(fpActionIni);
0093
0094   // Initialize visualization with the default graphics system
0095   //
0096   auto visManager = new G4VisExecutive(argc, argv);
0097   visManager->Initialize();
0098
0099   // Get the pointer to the User Interface manager
0100   //
0101   auto uiManager = G4UImanager::GetUIpointer();
0102
0103   // Process macro or start UI session
0104   //
0105   G4String fileName = "";
0106   G4String command = "/control/execute ";
0107
0108   if (ui) // interactive mode
0109   {
0110     G4Random::setTheSeed(fSeed);
0111     uiManager->ApplyCommand("/control/execute init_vis.in");
0112     ui->SessionStart();
0113     delete ui;
0114   }
0115   else if (argc == 2)  // batch mode
0116   {
0117     fileName = argv[1];
0118   }
0119   else if (argc > 2)
0120   {
0121     fileName = argv[1];
0122     fSeed = atoi(argv[2]);
0123   }
0124
0125   if (argc > 1)
0126   {
0127     G4Random::setTheSeed(fSeed);
0128     uiManager->ApplyCommand(command + fileName);
0129   }
0130
0131   // Job termination
0132   // Free the store: user actions, physics_list and detector_description are
0133   // owned and deleted by the run manager, so they should not be deleted
0134   // in the main() program !
0135   delete visManager;
0136   delete runManager;
0137 }
0138
0139 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....