dnadamage1/src/TimeStepAction.cc

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0025 //
0026 //
0027 /// \file TimeStepAction.hh
0028 /// \brief Implementation of the TimeStepAction class
0029
0030 #include "TimeStepAction.hh"
0031
0032 #include "G4AnalysisManager.hh"
0033 #include "G4DNAMolecule.hh"
0034 #include "G4Event.hh"
0035 #include "G4EventManager.hh"
0036 #include "G4Molecule.hh"
0037 #include "G4MoleculeTable.hh"
0038 #include "G4OH.hh"
0039 #include "G4SystemOfUnits.hh"
0040 #include "G4UnitsTable.hh"
0041
0042 #include <G4Scheduler.hh>
0043
0044 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0045
0046 TimeStepAction::TimeStepAction() : G4UserTimeStepAction()
0047 {
0048   AddTimeStep(1 * picosecond, 0.35 * picosecond);
0049   AddTimeStep(10 * picosecond, 1 * picosecond);
0050   AddTimeStep(100 * picosecond, 3 * picosecond);
0051   AddTimeStep(1000 * picosecond, 10 * picosecond);
0052   AddTimeStep(10000 * picosecond, 100 * picosecond);
0053 }
0054
0055 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0056
0057 TimeStepAction::~TimeStepAction() {}
0058
0059 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0060
0061 TimeStepAction::TimeStepAction(const TimeStepAction& other) : G4UserTimeStepAction(other) {}
0062
0063 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0064
0065 TimeStepAction& TimeStepAction::operator=(const TimeStepAction& rhs)
0066 {
0067   if (this == &rhs) return *this;
0068   return *this;
0069 }
0070
0071 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0072
0073 void TimeStepAction::UserReactionAction(const G4Track& trackA, const G4Track& trackB,
0074                                         const std::vector<G4Track*>* pProducts)
0075 {
0076   if (pProducts
0077       && (GetMolecule((*pProducts)[0])->GetDefinition() != G4DamagedDeoxyribose::Definition()))
0078   {
0079     return;
0080   }
0081
0082   // check for the case "no product"
0083   if (!pProducts) {
0084     return;
0085   }
0086
0087   auto phyEventId = G4EventManager::GetEventManager()->GetConstCurrentEvent()->GetEventID();
0088
0089   const G4Track* DNAElement = nullptr;
0090   const G4Track* radical = nullptr;
0091   if (GetMolecule(&trackA)->GetDefinition() == G4Deoxyribose::Definition()) {
0092     DNAElement = &trackA;
0093     radical = &trackB;
0094   }
0095   else {
0096     DNAElement = &trackB;
0097     radical = &trackA;
0098   }
0099
0100   if (GetMolecule(radical)->GetDefinition() != G4OH::Definition()) {
0101     return;
0102   }
0103
0104   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
0105   analysisManager->FillNtupleDColumn(2, 0, DNAElement->GetPosition().getX() / nm);
0106   analysisManager->FillNtupleDColumn(2, 1, DNAElement->GetPosition().getY() / nm);
0107   analysisManager->FillNtupleDColumn(2, 2, DNAElement->GetPosition().getZ() / nm);
0108   analysisManager->FillNtupleSColumn(2, 3, GetMolecule(radical)->GetName());
0109   analysisManager->FillNtupleIColumn(2, 4, G4int(phyEventId));
0110   analysisManager->AddNtupleRow(2);
0111 }