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0001 =========================================================
0002 Geant4 - dna examples
0003 =========================================================
0004 README file
0005 ----------------------
0006
0007 This directory contains a set of Geant4-DNA examples.
0008
0009 Physics
0010
0011 - dnaphysics
0012 The dnaphysics example shows how to simulate track structures in liquid
0013 water using the Geant4-DNA physics processes and models.
0014
0015 - clustering
0016 Clustering application for direct damage extraction.
0017
0018 - icsd
0019 This example shows how to use cross section models for DNA materials
0020
0021 - mfp
0022 This example shows how to simulate mean free path in liquid water
0023
0024 - microdosimetry
0025 The microdosimetry example simulates the track of a 5 MeV proton in
0026 liquid water.
0027 Geant4 standard EM models are used in the World volume while Geant4-DNA
0028 models are used in a Target volume, declared as a Region.
0029
0030 - microprox
0031 Computation of proximity functions in liquid water
0032
0033 - microyz
0034 Simulation of microdosimetry spectra
0035
0036 - range
0037 Simulation of ranges.
0038
0039 - slowing
0040 Simulation of slowing down spectra.
0041
0042 - splitting
0043 Use of variance reduction to improve the computational efficiency of
0044 ionization.
0045
0046 - spower
0047 Simulation of stopping power.
0048
0049 - svalue
0050 This example shows how to simulate S-values in spheres of liquid water
0051 using the Geant4-DNA physics processes and models.
0052
0053 - wvalue
0054 This example shows how to simulate W-values in liquid water
0055 using the Geant4-DNA physics processes and models.
0056
0057 - AuNP
0058 Simulation calculates absorbed dose around AuNP
0059
0060 Chemistry
0061
0062 - chem1 Simple activation of the chemistry module.
0063 - chem2 Usage of TimeStepAction in the chemistry module.
0064 - chem3 Activate the full interactivity with the chemistry module.
0065 - chem4 Simulation of radiochemical yields with the chemistry module.
0066 - chem5 Variation of chem4, using the contructors G4EmDNAPhysics_option8 and
0067 G4EmDNAChemistry_option1.
0068 - chem6 Scoring of the radiochemical yield G defined as a function of time
0069 and LET.
0070 - scavenger
0071 Activation of the scavenging process in chemistry
0072 - UHDR Ultra High Dose Rate
0073
0074 Geometry and other
0075
0076 - pdb4dna
0077 Usage of the Protein Data Bank (PDB) file format to build geometries.
0078
0079 - wholeNuclearDNA
0080 Geometrical description of a full simplified cell nucleus.
0081
0082 - dnadamage1
0083 Damage simulation on a chromatin fiber.
0084
0085 - neuron
0086 Irradiation of a realistic neuron cell.
0087
0088 - moleculardna
0089 Damage simulation on DNA geometries.
0090
0091 - jetcounter
0092 A setup for simulation of a typical experiment with the Jet Counter nanodosemeter
0093
0094
0095 See the README page inside each example for more detail.
0096
0097
