moleculardna/include/PlacementVolumeInfo.hh

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0025 //
0026 //
0027 #ifndef MOLECULAR_PLACEMENT_VOLUME_INFO_HH
0028 #define MOLECULAR_PLACEMENT_VOLUME_INFO_HH
0029
0030 #include "globals.hh"
0031
0032 #include <map>
0033
0034 class OctreeNode;
0035
0036 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0037
0038 class PlacementVolumeInfo
0039 {
0040   public:
0041     PlacementVolumeInfo() = default;
0042
0043     PlacementVolumeInfo(OctreeNode*, OctreeNode*, std::map<G4int, int64_t>);
0044
0045     virtual ~PlacementVolumeInfo() = default;
0046
0047     inline auto GetOctree() const { return fpOctree; };
0048
0049     inline auto GetHistoneOctree() const { return fpHistoneOctree; };
0050
0051     int64_t GetPairsOnChain(G4int idx) const;
0052
0053     int64_t GetTotalBasePairs() const;
0054
0055     inline int64_t GetTotalHistones() const { return fNHistones; }
0056
0057     inline void SetNHistones(G4int histone) { fNHistones += (int64_t)histone; }
0058
0059     G4int GetNumberOfChains() const { return fBasePairsInChain.size(); };
0060
0061     void SetOctree(OctreeNode* octree) { fpOctree = octree; };
0062
0063     void SetHistoneOctree(OctreeNode* octree) { fpHistoneOctree = octree; };
0064
0065     inline void SetPairsOnChain(G4int chain, int64_t pairs) { fBasePairsInChain[chain] = pairs; };
0066
0067   private:
0068     int64_t fNHistones = 0;
0069     OctreeNode* fpOctree = nullptr;
0070     OctreeNode* fpHistoneOctree = nullptr;
0071     std::map<G4int, int64_t> fBasePairsInChain;
0072 };
0073 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
0074
0075 #endif  // MOLECULAR_PLACEMENT_VOLUME_INFO_HH