dna/cellularPhantom/cellularPhantom.cc

0001 //
0002 // ********************************************************************
0003 // * License and Disclaimer                                           *
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0024 // ********************************************************************
0025 //
0026 // -----------------------------------------------------------------------------
0027 //       MONTE CARLO SIMULATION OF REALISTIC GEOMETRY FROM MICROSCOPES IMAGES
0028 //
0029 // Authors and contributors:
0030 // P. Barberet (a), S. Incerti (a), N. H. Tran (a), L. Morelli (a,b)
0031 //
0032 // a) University of Bordeaux, CNRS, LP2i, UMR5797, Gradignan, France
0033 // b) Politecnico di Milano, Italy
0034 //
0035 // If you use this code, please cite the following publication:
0036 // P. Barberet et al.,
0037 // "Monte-Carlo dosimetry on a realistic cell monolayer
0038 // geometry exposed to alpha particles."
0039 // Ph. Barberet et al 2012 Phys. Med. Biol. 57 2189
0040 // doi: 110.1088/0031-9155/57/8/2189
0041 // -----------------------------------------------------------------------------
0042
0043 #include "G4RunManagerFactory.hh"
0044 #include "G4UIExecutive.hh"
0045 #include "G4VisExecutive.hh"
0046 #include "G4UImanager.hh"
0047
0048 #include "ActionInitialization.hh"
0049 #include "DetectorConstruction.hh"
0050 #include "PhysicsList.hh"
0051
0052 int main(int argc,char** argv) {
0053
0054   // Detect interactive mode (if no arguments) and define UI session
0055   G4UIExecutive* ui = nullptr;
0056   if ( argc == 1 ) { ui = new G4UIExecutive(argc, argv); }
0057
0058   // (Optionally) Choose the Random engine
0059   //G4Random::setTheEngine(new CLHEP::RanecuEngine);
0060   //G4Random::setTheSeed(1408);
0061
0062   // Construct the default run manager
0063   auto* runManager = G4RunManagerFactory::CreateRunManager();
0064
0065   // Set mandatory user initialization classes
0066   DetectorConstruction* detector = new DetectorConstruction;
0067   runManager->SetUserInitialization(detector);
0068
0069   runManager->SetUserInitialization(new PhysicsList);
0070
0071   // User action initialization
0072   runManager->SetUserInitialization(new ActionInitialization());
0073
0074   G4VisManager* visManager = new G4VisExecutive;
0075   visManager->Initialize();
0076
0077   // Get the pointer to the User Interface manager
0078   G4UImanager* UImanager = G4UImanager::GetUIpointer();
0079
0080   // Process macro or start UI session
0081   if ( ! ui ) {
0082     // Batch mode
0083     G4String command = "/control/execute ";
0084     G4String fileName = argv[1];
0085     UImanager->ApplyCommand(command+fileName);
0086   }
0087   else {
0088     // Interactive mode
0089     UImanager->ApplyCommand("/control/execute vis.mac");
0090     ui->SessionStart();
0091     delete ui;
0092   }
0093
0094   // Job termination
0095   delete visManager;
0096   delete runManager;
0097
0098   return 0;
0099 }